Salvelinus namaycush (lake trout): 120037549
Help
Entry
120037549 CDS
T07522
Symbol
stab1
Name
(RefSeq) stabilin-1
KO
K19020
stabilin-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120037549 (stab1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120037549 (stab1)
Glycosaminoglycan binding proteins [BR:
snh00536
]
Hyaluronan
Cell surface receptors
120037549 (stab1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
FXa_inhibition
EGF_Teneurin
cEGF
EGF
Herpes_UL4
Motif
Other DBs
NCBI-GeneID:
120037549
NCBI-ProteinID:
XP_038839507
UniProt:
A0A8U0Q9Y5
LinkDB
All DBs
Position
Unknown
AA seq
2276 aa
AA seq
DB search
SRCDCMRGWEGSTPSSGCTLKNVCHDTTCHLNVRCETGLDGYPRCLCDSQKIGDGYRCYG
NLMERLVELNREGTHKGKLSGAISLFVGGCMLTMSQQGPFTAFIPLRIVPLAGVTDESVC
QRYLLRGQYLYKSLGRTDVYTASGLQLRFKPNKQFILVKSPETLYSVIQQDIPAANGVIH
IIDQPIMPRNIIPDSPKDEQFADKTIGEILTKDEKYNRFLSLVDNCGTTLPLRGPGPLTV
FVPTNDAVDKFRDGRLIYMLYHAQGKLQELLKHHIYSQAALTVDQLASMSLIQTMANQIL
LVNITNDGLVLLGGKPLQITNIMASNGVIHMIDGVLVPPSIVPILPKRCDVTENKIIVGP
CVRCSHLYESHCPKGSIELQSHMKDCDYEAFPFNPTLNKGCAKYCNTTIERAECCSGFYG
PECKTCTGGFQTPCYGKGTCFDGIHGNGSCHCEEGFKGIACHICSDPNKHGEKCDQDCRC
LHGVCDNRPGSKGACRGGSCLEGYSGNYCDKEAKACNSDGLSEHCHVHAFCSFVGSHTTC
ECMSGYEGDGHSCILVNPCLKADRGGCDVNAQCESSGPANVSCVCNEGWTGDGLVCTEVD
NCLLETRGGCHKDADCRSLGPGQSECTCLRGYMGDGTVCDLINPCQKNNGGCHSLAKCES
VDGENIICVCPEGYVGDGVTCYGTMLEELDMNINLYGFHRLIQRSSEFDLSGNITALVPS
RDVIRNLTSSEQDFWFSRYRLPYLLKAHFLRGIFSIEDLEKQVNQRLPTLHLPTTWEVKA
VGGEVWIENATILTPNIPSINGYIHIINTVLFPPLSDIPPEPPGLMQFLNTTPTFSLFTQ
AALLYNLTEEIGVYDYTLLLPHDAAVRDYLRQTNSSQLGEEVLKYHVILHEQLFPDHLRD
GMVKDTLLGRAYQIMFHLGKNNETLANDVLLDGSHSETRNGVILAVPQVLQVHKNRCIQD
VILRVRGRCSACDEKPRCFLSYKPAIREYPRNMRSNCKYRKRVGSRRKSVAGCIIDCLKT
TQDHSCCPGYFGHYCFKCPGELDNWCSGNGRCKDGNLGTGECLCNEGFHGTACETCEPGR
YGKDCKSECSCAHGKCLDGVTGNGRCVCYKGWRGVNCSKEIVSDACGGICDENANCKPKE
AEGPTCQCVAGFTGNGTVCTEVNLCATGNGGCAQIANCTKTLPGERTCTCPEGYTGDGVW
CLEIDGCLVNNGGCSSTAECIKTGPNRVACNCLSGYSGNGHFCFPFNPCRIENGGCGKYA
RCRYMGNGVRNCSCFGEHVGDGFDCHGKTRTEIFRQSEAALYRRMIMVSDVRSLFGDGPF
TAFIPPANSNFSIEAWESQGRSADLANYHMVSCETLMLSDLKTTSKAVAFSGHQLTFSLK
DGSVYINDDARIVSSDYVTADGVIHYTDKVLTPYDLKDQKAIPSKLNFSEAGELYGYMKF
IKLVQDANMLNLVESSIHQPLTMLWPSDAALSSLSEERQHWLYSLDHRDKLRAIIKAHII
RNIKKMTLTPVSTYRTMHGSTFTFNCNKKVVGDIMVNDNMARVLDRFMMFNGGVAYGIDQ
LLEPPGLGAHCDGLEDRTVYSRCGNCLSPRRCPLGTEDMGKTEICSFINPYSMLYPQRHS
VMYDHDFSLYPSLLRHNMGQRMGCKKMCKSQAWVMSCCKNHYGRDCQVCSGGLEAPCGDH
GNCDDGRMGSGRCRCHDGFKGIACELCELEHYGTNCTACNCTNQGQCEEGMEGDGSCSCT
EGWTGDRCHLKIEKKPVCSPECHGNAVCLPDNICLCQSQYVGDGLNCTAPDLCAEYNGGC
HQHAACLQTDLQVNCTCLSGYEGDGYVCSPINRCVTETNGGCSDFATCLFTGPNERQCEC
LDGYVGNGLQCLEKVVPPVDRCLEENGGCDPQATCKDLHYHSNTAGVFHLRSSAGKYQLN
YTDAELACQAEGATLATFSQMADAQQLGMHRCVAGWIQGKKVGYPTRFPSVNCGDNHVGI
VLYKDPVDPSSKYDTFCYRLSDVSCVCGSGYVGNGDFCNGDLASVVATNLNYSVFYNILL
KYAGSSTEGEVLLDFLSSSSSYATLFVPLNAGFSENETLSDRDVEYHISTNNSIMFYEDL
KHDGVIPSRLGYNLSLVISPSNTTQQNQWTGLEPQTFKLVNRRLVLTWDIPAYNGIIHVI
EGPLRAPPLPVHHAQSTGHAQGGGTVATSILVTCLIVCVIAGLTYYVFKHKNDAFRFHYF
KNEEEGDKPALVSIPNPLYIGSRAFNQPFGINEQFEEAEPAEPAEPAEPAPQLLDL
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
tctagatgtgattgtatgcgtggttgggagggctctaccccgtcctccggctgtaccctg
aagaatgtatgtcatgacaccacctgccacctcaacgtccgctgtgagaccggcctggac
ggataccccaggtgcttgtgtgactcccaaaagatcggcgatggctaccgttgttatggc
aacctgatggaacggctagtggagctgaacagggaggggacacacaaggggaagctctct
ggagccatctcgctatttgtgggaggctgtatgctgaccatgagccaacagggaccgttc
accgcgttcatccctctacgcattgtgcctctagcaggcgtgaccgacgagtctgtgtgt
caacgttacctgctgaggggtcagtacctgtataaaagcctgggtagaaccgacgtctat
actgcaagtggactacaactcaggttcaaacccaataagcaattcatattggtgaagtct
cctgagactctctactcagtcatccagcaggacatcccagcagccaatggggttatccat
atcatcgaccagccaatcatgcccaggaatatcatccctgacagcccaaaggatgagcag
tttgctgataagaccatcggggagatcctgacaaaggatgagaaatacaaccgtttcctc
tcgctggtggacaactgtgggactactctgcctctgagaggtcctggtcctctcactgtg
ttcgtcccgaccaacgatgctgtggacaagttcagagacggcaggctgatatatatgctg
taccacgcccagggcaagcttcaagagctactgaaacaccacatctactcccaggctgcg
ttgaccgtggaccagctggcaagcatgagtctgattcagactatggccaatcagatccta
ctagtcaacatcaccaacgatggcctggtgctgctgggcgggaaacctcttcagattact
aatattatggcatccaatggtgtgatccatatgattgacggggttctagtcccgccctcg
atcgtccccatcctgcctaagagatgtgatgtcacagagaacaaaatcatcgtgggcccg
tgtgtgaggtgcagccatctctatgagtcccattgccccaagggaagcatagaactgcaa
agtcacatgaaggattgtgactatgaggcatttcctttcaaccccacgctcaataaaggt
tgtgctaaatactgcaacactactattgagagagcagagtgctgcagtggcttctatgga
cctgaatgtaaaacgtgtacgggaggtttccagacaccctgttatggcaaaggcacttgt
tttgatggtatccatggtaacgggtcatgtcactgcgaggagggcttcaaggggatcgcc
tgtcacatctgttccgaccccaacaaacacggagagaagtgtgaccaggactgccgctgt
ctccatggtgtgtgtgataaccgcccaggcagtaagggtgcatgtagagggggctcctgc
ctggagggttactctggaaactactgtgataaggaggctaaggcctgtaactctgatggt
ctatctgaacactgccatgtccacgccttctgcagcttcgtcggcagccacaccacgtgt
gagtgtatgtcggggtatgaaggagatggacactcttgcatcctggtcaacccctgcctg
aaggctgacagaggaggctgtgacgttaacgcccagtgtgagtcctcagggccagctaac
gtgtcgtgtgtttgtaacgagggctggacaggagacggcctggtctgtactgaggtggac
aactgtctcctggagaccagaggtggctgccataaggatgcagactgcaggtctctaggc
ccaggacagagtgagtgtacctgtttgaggggttacatgggggatgggacagtctgtgat
ctcatcaacccttgtcagaaaaacaacggaggatgccattctctggctaagtgtgagtca
gtggatggagaaaacatcatctgtgtctgtccagaagggtacgttggagacggagtcacg
tgctacgggacgatgctagaggaactggacatgaatatcaatctgtacggttttcaccgc
ctgatacagaggtcgtcagagtttgacctgagtgggaatataacggctctggtgccttcc
agggacgttatccgcaatctaaccagctctgagcaggacttctggtttagccgctacagg
ctcccgtaccttctaaaagcccacttcctccgggggatattctccatagaggacctggag
aagcaggtcaaccagaggttacccactctacacttgcctactacatgggaggtcaaagct
gttggtggggaagtttggatagagaatgcaaccatcctcacccccaacatcccttctatc
aacggatacatccacatcattaatacggttctgttcccccccttgtcagacatcccacca
gaacccccaggcctgatgcagttcctcaacaccacccctaccttcagtctctttacacag
gcagcactgctctacaacctgacagaggagattggtgtctatgattatacgctcctactt
ccacacgacgccgccgtccgagattacctgagacagaccaactcttcacaactgggtgaa
gaggtattgaaataccacgtcattcttcacgaacagctgttcccggatcatctgagggac
gggatggtgaaggacacattacttgggagagcctaccagatcatgttccacctgggcaag
aacaatgagactttggccaatgatgttctgctggatgggagccacagtgagacgagaaac
ggggtgatcctggccgttccccaagtcttacaggtccataagaaccgatgcattcaagac
gtgatcctacgggtcagagggaggtgctcagcctgtgatgaaaaacccagatgtttcctt
agctacaagccagccattagggagtaccctaggaacatgaggtctaactgcaagtacagg
aagagggtgggatctaggaggaagtccgtggctggctgcattattgactgtttgaagacg
acgcaggaccactcgtgctgcccgggatactttggtcactactgttttaaatgccctggg
gagctggacaactggtgctcaggaaacggaaggtgtaaggatgggaacctagggactggg
gagtgtctttgcaacgagggtttccatgggacagcctgtgagacctgcgaaccgggacgc
tacggcaaggactgcaagtcagagtgcagctgtgctcatgggaagtgtctggatggagtg
acaggaaacgggaggtgtgtctgctacaaaggctggagaggagtcaactgctccaaggag
atcgtgtctgacgcctgtggcggaatctgtgatgaaaatgcaaactgtaagcccaaggag
gcagagggccctacatgccaatgtgttgcaggcttcacaggcaacggaaccgtttgcaca
gaggtgaacctgtgtgccactgggaacggaggctgcgctcagattgccaactgcaccaag
acgttacctggggagaggacctgtacctgtccagaaggatacactggagacggggtgtgg
tgtctagagatagacggttgtttggttaacaacggtggatgttccagtactgcagagtgc
atcaaaacaggaccaaaccgggttgcctgtaactgtttatctggctactctgggaatgga
catttctgcttcccgttcaacccctgtcggattgaaaacgggggctgtggaaagtacgcc
aggtgtcgttatatgggcaacggagtgaggaactgctcctgctttggagaacacgtagga
gatggcttcgactgccacggcaagacccgcacggagatatttcgccagtcagaagctgcg
ttgtaccgtcggatgataatggtgtctgatgtgaggagtctgttcggtgatgggcccttc
actgcattcatacctcctgcaaacagcaacttctcaatagaggcatgggagtcacagggc
cgcagcgcagacctggcaaactaccacatggtgtcttgtgagactctgatgctctctgac
ctgaagaccacctcaaaggctgtggccttctccggacaccagctcaccttcagcctcaag
gatggctctgtgtacattaatgacgacgctaggatagtctccagtgattatgtgacagct
gacggtgtgatccactacactgacaaggtcctcaccccgtatgacctgaaggatcaaaaa
gccataccatccaagcttaatttcagtgaagcaggggaactatatggatatatgaagttc
atcaaactggtgcaggatgccaacatgctgaacctggtagagagctccatccaccagccc
ctgaccatgttgtggccgtctgacgctgctctcagctctctgtctgaagagagacaacac
tggctctacagtcttgatcacagggacaaactcagagccatcatcaaagctcacatcata
cgcaatatcaagaagatgaccttgacgccggtctctacctaccggacaatgcacggatca
accttcacctttaactgtaacaagaaagtcgttggggacatcatggtgaatgacaacatg
gcgagggtcctggatcgtttcatgatgtttaacgggggcgtagcgtacggcatcgaccag
ctactggaacctcccggtctgggtgcacactgtgatggactggaggacaggactgtatac
agtcgatgtggaaactgcttgagtccccgccgctgtcccctaggaactgaagatatgggc
aagactgagatctgcagcttcatcaacccctactctatgctctaccctcaacgccacagt
gtgatgtatgaccacgacttcagcctctacccctctttgttgaggcacaacatgggccaa
aggatgggctgtaagaagatgtgtaagagtcaagcctgggtcatgagttgctgtaagaac
cactatggaagagattgccaagtgtgttctggtgggttggaggccccctgtggagatcac
gggaactgtgatgatggacgcatggggtctggacggtgccggtgccacgatggcttcaaa
ggaatagcctgtgagctgtgtgaacttgaacactatggaaccaattgtacagcgtgtaac
tgcacaaatcagggccaatgtgaggaggggatggagggagatgggagctgttcctgtact
gagggctggactggagaccgctgccaccttaaaatagagaagaagccggtgtgttctcca
gagtgccatggcaacgctgtgtgtctgcccgacaacatctgtctctgtcagtcacagtat
gtgggggacggcttgaactgcactgctcctgatctgtgtgcggagtacaacgggggctgc
caccagcatgcagcctgtctccagacagacctgcaggtcaactgtacgtgtctgtctggc
tacgagggtgacggctatgtctgctcacctatcaacaggtgtgtcacagagaccaacgga
ggatgcagtgacttcgctacttgcctgttcacagggcctaatgagcgtcagtgcgagtgt
cttgatgggtacgtggggaacgggctccagtgtctggagaaggtggttccacccgtcgac
cgctgtctggaggagaacggaggatgtgacccccaggccacgtgcaaggacctgcattac
cacagtaacactgccggagtgttccacctgcgttccagtgcagggaagtaccagctgaac
tacacagatgctgagctagcctgtcaagctgagggggctacactcgccaccttctctcag
atggctgatgcacaacagctgggaatgcaccgatgtgttgctggatggatacaagggaag
aaagtgggctatccaaccaggtttccctcggtcaattgtggtgacaaccatgttggtata
gtgctatacaaagaccctgtggaccccagcagcaaatacgacaccttctgttacagactg
tcagatgtgtcctgtgtgtgtggaagtgggtacgtaggcaacggggacttctgtaacgga
gacctggccagtgttgtggctaccaacttaaactactctgtattctacaatatattgttg
aagtatgcaggctcgtcgacagagggagaagttctgttggactttctgtccagcagttca
tcctatgccactctgtttgtgccactcaacgctgggttctctgagaatgagacgttatca
gaccgggatgtggagtatcatatctccacgaacaacagcattatgttctacgaggacctg
aaacatgatggagtcattccttccagactgggatataatctctcactggtcatttccccc
agcaacaccacacagcagaaccagtggaccggtctggaaccccagacattcaagctagtg
aaccggaggctagtgttgacctgggacatcccagcatacaatggaattatccatgtcata
gagggcccactcagagccccgcccttaccagtgcaccatgcccagtcaacaggccacgcc
caagggggcgggactgtggccacttccatcctggtcacctgtctgatagtctgcgtcatc
gctggcctcacctattacgtcttcaaacacaagaatgacgccttccgcttccactacttc
aagaatgaagaggagggcgataagcctgctctggtgtctattcccaacccgctctacatc
ggttccagagccttcaaccaaccttttggtatcaatgaacaatttgaagaggctgaacca
gcagaaccagcagaaccagcagaaccagctcctcaactactggatttatga
DBGET
integrated database retrieval system