Salvelinus namaycush (lake trout): 120037668
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Entry
120037668 CDS
T07522
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120037668
04020 Calcium signaling pathway
120037668
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120037668
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120037668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
120037668
NCBI-ProteinID:
XP_038839592
UniProt:
A0A8U0QAB1
LinkDB
All DBs
Position
Unknown
AA seq
2083 aa
AA seq
DB search
MVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFF
IFGVIGVQLWAGLLRNRCYPKENFTLSKDISLPRPYYMADEDDERPFICSLAQDNGIMAC
TDVPARRELGRTCCLDKDDVTHRQGLGLSPEPLVNGSVSGPGLCVNWNQYYTRCHTGHSN
PHKGAINFDNIAYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINL
CLVVIATQFSETKQREHQLMQEQRAQAHSSSTVASMTEPSAGCYESVFQLVCHVLRKARR
YGVWRPIHAKIHLNISISPDHASPGDSIALTVSPATDGCPHCTVALSISDGAGPADSLAN
LEVEEGALEETDGEGSKCDAGKEEVKDAAPAKVSGGCRRGCGELWEETRLMLLGIVESKY
FNRGIMIAILINTISMGIEHHNQPEELTNVLEICNIVFTSMFAMEMILKITASGCFNYLR
NPYNVFDGVIVIISVCEIIGQSDGGLSILRTFRLLRVLKLVRFMPALRRQLVVLMKTMDN
VATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQE
DWNTVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSEDDSS
PSNFDESEKLNDSLKLSDPKICTLTPNGHLELTTLTPVMTPRGSYPTDRLTYALGSRKSS
VMSLGKANLEHRRSFSLHHGRSSLHHHWGRPPPPQSAWNRSWNSLGCPSRGRGGMGAGVV
GGSLRVRSPHSHIHSLYHSAEHEFLLSPAFHLPPRHAPPLPLLSRRNAIRHRDRRALSLE
LPNMLQVPGGPPPRPNPRMRSVSGGGSSGSGGMVVEHHDCNGKAGPQTAQLLAEVFPQLN
LAKDRSDLDEETDYSMCFRIQKMMEVYRPDWCEKREDWSVYLFSPQNKFRLLCQSIIAHK
LFDYVVLSFIFLNCITVALERPKILQSSLERLFLTVSNYVFTAIFVAEMTVKVVSKGLYL
GEKAYLKSSWNVLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGL
KLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCLGLEVKNITNKSDCLQA
NYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPSINNNPWMLLYFI
SFLLIVSFFVLNMFVGVVVENFHKCRQNQEVEEAKRREEKRQRRMEKKRRKAQKLPYYTN
YSDGRLLIHTLCTSHYLDLFLTFIICINVITMSLEHYSQPQSLETSLKYCNYFFTTTFVV
ESVLKLIGFGFRRFFKDRWNQLDLSIVLLSVMGIILEEIDYNASLPINPTIIRIMRVLRI
ARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNADYPC
EGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGPSDYPCHAGLQFISPMYF
VSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELELAQGQLQLPTCCMGGLG
TGLLVAGASGASGAPGCRGGGGGLEGGTRRKLYSPAQESQWLDSVSLLIKDSFEGEMLMI
DNLSGSVFHHYSSTSSPVWKDYKRNLQEIRLAEVEQASLMSEQLSDKSSSLALPDDLSLD
DHSDYQLLVRDSKEERGSSDSHSSEELREIQAGCGGRWGHGGSRPHSRGPEDGVGFLLEV
GVQPQFQSQSLQFLHHNRATAVPPPIHRTVVDPGGREASRLPSPASWATLRSPGANSMVL
DSPGANSRILASPGANSRVLYSPGANSRVLAYPGANSRVLDSPGANSRVLDSSGANSRVL
DSQHPSHSDSSLATGSSEGSLQTTLEEGLSFSVSPPRGDLGLSLALPLLCPLPLPHLDEP
RQTPRSLVHPSMRGHSTAFNLQATRGHQRSQSSCGSSTSPGCPRQDSMDPSDDDCGIGIG
GEGSSQAFNSEHLSETLSSLSLTSLLSPSSLAPPLVKKCNSTGSLDQANLSVRNKDGQQY
YEIDAHRYLTNPWTEKRGGQEGETGFGVKSTSQMMDAGSRKNR
NT seq
6253 nt
NT seq
+upstream
nt +downstream
nt
gatggtagaatactcattggacctccagaacatcaacctgtcagccatcaggacagtcag
ggtcctcagacccctcaaagccatcaacagagttccaagtatgcgtatcctggtgaatct
cctcctggacactctccccatgctgggcaacgtcctgctactctgtttcttcgtcttctt
catcttcggtgtcatcggagtgcagctgtgggcggggctactgaggaaccgctgctaccc
caaggaaaacttcaccctttctaaggacatctccctccctcgcccctactacatggcaga
cgaggatgatgagcgacccttcatctgctctctcgcccaggacaacggcatcatggcgtg
caccgacgtcccggcccgccgagaactaggacgcacctgctgcctggacaaggacgatgt
gacacacagacagggtttggggctgagtcctgaacccctggttaacgggtcagtgagcgg
gcctggactgtgtgtcaactggaaccagtattacacacgctgtcacacgggccacagcaa
cccacataaaggagccatcaacttcgacaatatcgcctacgcttggatcgtcatctttca
ggtgatcaccctggaaggctgggtagagatcatgtactatgtaatggatgctcactcctt
ctacaacttcatctactttatactgctcatcatcattggttctttcttcatgatcaatct
ctgcctggtggtgatcgccacccagttcagtgagacgaagcagcgggagcaccagctgat
gcaggagcagagagcccaggcccactcttcctctactgtagccagcatgactgagccctc
ggcaggctgctatgagtccgtcttccagctggtctgccacgtcctccgcaaggcccgcag
gtatggagtatggaggcccattcatgccaaaatacatttgaatatttctatttctcccga
ccacgcctccccaggagactccatcgccctcaccgtctcccccgccaccgacggctgccc
tcattgcaccgtcgccctgtcaatcagcgacggggcgggacctgccgacagcctggccaa
tttggaggtggaggaaggagctttggaggagacggacggggagggcagcaaatgcgatgc
cgggaaggaggaagtgaaagacgcggctcccgctaaggtttctgggggatgtaggcgagg
gtgcggggagctgtgggaggagacgaggttgatgttgttggggatcgtggagagcaagta
cttcaatagaggaattatgatcgctatcctcatcaataccatcagtatgggcatagaaca
ccacaaccagcctgaggaactaaccaacgtgttggagatctgtaacatagtattcactag
tatgtttgccatggagatgattctgaagataacagcgtccggatgtttcaactatctgag
aaacccctacaatgtgttcgacggtgtcatcgtcattatcagtgtgtgcgagatcatcgg
ccagtctgacggaggtctgtccatattgaggaccttcagactccttcgtgtcctgaagct
agtcaggttcatgcccgcgctgcgcagacagctagtggtcctgatgaagactatggataa
tgtggctaccttctgtatgctgttgatgctgttcatctttatattcagtatcttggggat
gcatatctttggctgtaagttcagcctgaagacagaggcaggagacactgttccagacag
gaagaactttgactctctactctgggccatcgtcactgtgtttcagatcctaactcagga
agactggaacacggtgctgtataatggaatggctgccacctctcctctagctgctctgta
cttcgtagctctcatgacgtttgggaactacgttctcttcaacctgctggtggccatctt
ggtagagggatttcaggctgagggagatgctaatcgctcctattcagaggatgacagttc
cccctctaactttgacgagagtgagaagcttaatgactctctcaaactgtctgatcctaa
gatctgcactttgacccctaacgggcacctggagttgaccacgttgaccccggtgatgac
ccccagggggtcgtaccccactgacaggctgacctatgccctggggtcacggaagagcag
cgttatgagtctgggcaaggccaacctggagcataggagatcattctctctgcaccacgg
ccgcagttccctgcaccaccattggggtcgccctccccctcctcagagtgcatggaaccg
cagctggaacagcctgggttgtccctcccgcgggcgaggggggatgggagcgggtgtggt
gggaggaagcctccgtgtccgaagcccccactcccacatccactccctttaccactcggc
tgagcacgagttcctcctctcccccgctttccacctcccccctcgccacgctccccctct
ccccctcctctcccgacgcaatgccatccggcaccgggaccgccgcgctctctccctgga
gctcccaaacatgctccaggtccccgggggacctccgcctcgccccaaccccaggatgag
gagtgtttctgggggagggagcagcggcagtgggggtatggtagtggagcaccatgattg
taatgggaaggcgggtccccagactgcccaactcctagcggaggtcttccctcagctgaa
cctcgccaaggacagatcggacctggatgaggagacagactatagtatgtgtttccgtat
ccagaagatgatggaggtgtacaggcctgactggtgtgagaaaagagaggactggtctgt
ctacctcttctcaccacagaacaagttcagactgctatgtcagtccattatagcccacaa
gctctttgactacgtggttttatccttcatctttctcaactgtatcactgtagcgctgga
gagacccaagatactgcagagcagcttggaaagactattcctcaccgtctccaactatgt
cttcacagccatatttgtagctgagatgaccgtcaaggtggtctctaagggtctgtacct
gggtgagaaggcctatctgaaaagcagctggaacgttctggatggtttcctggtcttcgt
gtcgttgattgacattgttgtgtccatggcaggcggggctaagatcctgggggtgctgag
agtgctcaggctgctcaggacactacgccctctcagggtgatcagtagagctccaggact
gaagctagtggtagagactctcatcacgtctctgaagcctataggaaacatcgtcctcat
ctgctgcgctttctttatcatcttcggcatcctcggtgtgcagctgttcaaggggaagtt
ttactactgcctgggtttagaggtgaagaacatcaccaacaagtctgactgtctccaggc
taactacagatgggttcaccacaaatacaactttgataacctgggacaggctctgatgtc
tctgtttgtgctggcatctaaagacggctgggtcaacatcatgtaccatggtctggatgc
tgtgggtatagaccaacagccgtctattaacaacaatccatggatgctcctgtacttcat
ctccttcctcctcatcgtcagtttcttcgttctcaacatgttcgtgggcgtggtggtgga
gaacttccacaagtgcagacagaaccaggaagtggaggaggccaaaaggagggaggagaa
acgacagagacgcatggagaagaagaggaggaaggcccagaagctaccctactataccaa
ctatagcgatggtcgtctattgatccacactctgtgtaccagccactacctggacctctt
tctcaccttcatcatctgtatcaacgtcattactatgtccctggagcactacagccaacc
acagtcattggagactagtctgaagtattgtaactatttcttcaccactaccttcgtggt
ggaatctgtcctcaagctcatcggcttcgggttccgacgcttcttcaaggacaggtggaa
ccagctggacctgtccatagtgttgttgtcagtgatgggcatcattctggaggagattga
ctacaatgcttctctacccatcaaccctaccatcatcagaatcatgagggtgctgcggat
agcacgagttctcaagctattgaagatggctacaggaatgagagctcttctggacacagt
ggttcaggctctacctcaggtggggaacctgggcctgctgtttatgttgctgttcttcat
ctacgctgctctgggggtggaactgtttggagagctggtgtgtaatgctgactacccgtg
tgagggcatgagtcggcacgccaccttcgagaacttcggcatggcctttctcaccctctt
ccaggtctccaccggagacaactggaacggcatcatgaaggacaccctgcgtgagtgccc
tccaggaccaagtgactacccgtgccacgctggactccagttcatctctcccatgtactt
tgtctccttcgtcctcaccgcccagtttgtcctcatcaacgtggtggtggccgtgctcat
gaagcacctagacgactcaaacaaagaggcccaggaggatgctgagatggatgcagagat
cgagctggagctagcccagggacaactccaactacccacctgctgcatgggggggctggg
cactgggctgctcgtggctggggcctctggggcctctggagcgcctggatgtaggggtgg
aggtggagggttggaaggagggaccagacggaagctgtactcacctgcacaggagagtca
gtggttggacagtgtatctctgctgataaaggactcatttgaaggagagatgctgatgat
tgacaacctctctggatctgtcttccatcactactcctctacctcttctcctgtctggaa
ggactacaagagaaatctgcaagagatccgattggctgaggtggagcaggcgtctctgat
gtcagagcagctgtctgacaagtcgtcatcattggcccttcctgatgatcttagtctgga
cgaccacagtgactaccagctactggtcagggacagcaaggaggagagagggagcagtga
ctcccacagttctgaggaattgagggagattcaggctgggtgtggagggcgttgggggca
cggaggttctcgaccccacagcagaggccctgaagatggggtaggattcctgctcgaggt
gggcgtccagccccagttccagagccagtctctccagttcctccaccacaacagagccac
agcggtccccccacccatccacaggacggtggtagacccaggggggagagaggcatccag
gctgccttccccagcctcctgggccactctgcgctccccaggggccaacagcatggtcct
agactccccaggggccaacagcaggatcctagcctccccaggggccaacagcagggtcct
atactccccaggggccaacagcagggtcctagcctacccaggggccaacagcagggtcct
agactccccaggggccaacagcagggtcctagactcctcaggggccaacagcagggtcct
agactcccagcacccgtcccacagtgactcgtccctggccacaggcagctcagagggcag
cctccagaccaccctggaggaaggtctcagctttagcgtctccccccctcgaggagacct
gggactctccctggccctgcctctcctctgccctctccccctccctcacctcgacgaacc
ccgacaaacccccagatcgctggttcacccctcaatgagaggccacagtaccgcattcaa
cctccaagccactagagggcaccagaggagccagagcagctgtggcagcagcaccagtcc
cggctgcccaaggcaagactctatggacccttcagatgacgattgtgggataggaatagg
aggcgaaggatccagtcaggcttttaacagcgaacatttatcagagacacttagtagttt
gtctctgacgtcactgctgtcacctagctccctggcacccccgctggtgaaaaagtgtaa
tagcactgggagtttggaccaggcaaatctttctgtcaggaataaagatggacaacagta
ctatgagatagatgctcatcggtacctcaccaacccttggactgagaagaggggtggaca
ggaaggggagacggggtttggagttaaaagtacgagtcagatgatggatgccggctcgag
gaaaaacagatga
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