Salvelinus namaycush (lake trout): 120037780
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Entry
120037780 CDS
T07522
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120037780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120037780
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120037780
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120037780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
120037780
NCBI-ProteinID:
XP_038839673
UniProt:
A0A8U0U4S8
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MMLCWGSTVEGQLGIGGARDPVCEPRSCQAFNGRGLKEVACGGRHSLFLLRDGRVYTCGS
NRCGQLGHDKPGDSPELVVALNTQKIGVVSCGQAHSMALNEQGQVFAWGAGGGGQLGLGT
AEETVPIPRLIKKLCEHRISQIMCGNKHCIALSKDGQLFTWGQNSSGQLGLGKGEPSTLS
PQPLKSLSGIPLAQITAGGDHSFALSLSGAVFGWGKNSAGQLGLNDKQDRSVPCHIKFLR
SQKVVYISCGDEHTAALTKDGGLFTFGDGSRGQLGHDSTNNEPLPRQVQELMGSEVSQIA
CGRHHTLAFVPSSGLVYAFGCNTNGQLGTGTRGDINSPLPVKSSLTGRLTGSPRHMSGPD
HYAITKINCGGDHNFLLYSDEKSSTAPEDFRVTNISRSISLINDASLNTWRMKLLDNTDS
TITNDVILLLSSTACWNASFLDESDDSHFKTNPKVPGIDLNSVRLLFETLSKPPFARLLE
QATKSFESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYITLTIPLAMAILRLDANP
SKVLDNWWCVVFWIPVDNWWCLVDGGVFSRLVDMYKSIVVFLLTGGKALLVPVFLENYTS
ATLKLLEKLHKVNLKAGHVEYNRFYIPDITTLVDIQEDYLKWFLSKAEIKMRTPAVQSSV
TLCAYPFILNAQAKTTMLQTDAELQMQMAVSGANMHNVFMLLTLEPLLARNPFLVLHVRR
DHLVSDALRELTIYSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTQ
YTQSNLLWFSDKCFVEHNWFNLIGIICGLAIYNSTVVDLHFPLVLYKKLLGVAPTLEDLK
ELSPTEGRSLQQLLDHEEDDVEETFCLNFAITREYYGLTEVKELIPGGDRITVDKNNREE
FVEAYLKYMFRDSVSELYQAFSSGFLKVCGGKILSLFQPSELMAMVVGNNNYNWEEMEKN
AVYKGEYSATHPTVRMFWEVFHEFPLEKKKRFLLFLTGSDRIPIHGMESLRIAIQSTSAE
EHYLPVAHTCYNLLDMPRYQTKETLHRRLTQAVEQYEGFSLV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgttggggcagtactgtggagggccagctgggtatcggcggagcgagggac
cccgtgtgcgaaccccggagctgccaggcgttcaatgggcgtggcctgaaggaggtggcg
tgcggcgggcgccattcgctattcctgttgcgtgatgggagagtgtacacgtgcggctct
aaccgctgtgggcagctgggccacgacaagccgggggactcgccagaactggtggtggcc
ctgaacacccagaagataggggtggtatcgtgcggccaggcccactccatggcgctgaat
gagcagggccaggtgtttgcctggggggccggtggagggggccagctgggtctggggacc
gctgaggagaccgtcccaatccccaggttgatcaagaagctgtgcgagcatcgcatctct
caaataatgtgtggcaacaagcactgcatcgcactctctaaagatggtcagctgttcacg
tggggacagaactcgagcggtcagctgggtttggggaagggagagcccagcaccttgtct
ccccagcccctcaagtctctgtcaggtatccccctggctcagatcaccgctgggggagac
cacagcttcgccctgtccctctctggagccgtgttcggctggggcaagaacagcgccgga
cagctggggctaaatgacaaacaggaccggtctgtcccttgccacatcaagttcctcaga
tcccaaaaagtggtttatatcagctgtggagacgagcatacagctgccctcaccaaggat
gggggtttgtttacgtttggggacggctctcgtggtcaactgggtcatgactccaccaac
aacgagcctctacccagacaggtgcaggagctgatgggcagcgaggtttcccagattgcc
tgtggcagacaccacaccctggcgtttgtgccttcctccggtctggtgtatgctttcggt
tgtaacacaaatggtcagctgggcactgggacacgaggtgacatcaatagcccacttcct
gtcaaaagcagcctcacaggaaggctcacaggaagtcctcgtcatatgtcagggccagat
cattatgccattacaaaaatcaactgtggaggggaccataacttcctattgtattcagat
gaaaagagttccaccgctcctgaagacttccgcgtcactaacatcagtagaagcatctct
ttgataaatgatgccagtttgaatacgtggaggatgaaactcctagacaacacagactcc
actatcaccaatgacgtcattctcctgctgtcttccaccgcctgttggaacgccagcttc
ctggatgagagtgatgacagccattttaagaccaaccctaaagtccctggcatcgatctc
aactcagtccgcctgctgtttgagacactcagtaaaccgccctttgccagactactggag
caggccactaagagttttgagagcctgctgatcccccagctgccctgctctccccctgac
gttgaggccatgaggatctacctgatcctgtcggagtgtcccgccctgcacgactccaag
aactacatcaccctcaccatccccctagccatggccatactccgcctggatgccaacccc
agcaaagtgcttgataactggtggtgtgttgtattctggatccccgtagataactggtgg
tgcctggtggacggcggtgtgttctccaggctggtggacatgtataagagcatcgtggtg
ttcctgttaaccggaggaaaggccctgctcgtccctgtcttcctagaaaactacaccagt
gccacgctaaagcttctagagaaacttcataaggttaacctgaaggccgggcatgtggag
tacaaccgcttctatatccctgacatcaccaccctggtggacatccaggaagactacctc
aagtggtttctgagtaaagcagagattaaaatgagaacaccagcagtacagagctcagtg
actttatgtgcctacccgttcatactgaacgcccaagccaagaccaccatgctgcaaact
gacgctgagctacagatgcagatggcggtgagcggggccaacatgcataacgttttcatg
ctgctgacgctggaacccctcctggcgcggaaccccttcctggtgctccacgtacgcagg
gaccacttagtgagcgacgcgctgagagagctcaccatctactctgacgtcgacctcaag
aagcccctcaaggtgatatttgatggggaggaggcggtggatgcagggggggtaaccaag
gagttcttcctactgctgttgaaggagctgatggaccctgtgtacggcatgttcacccag
tacacccagtccaacctgctctggttctctgataaatgttttgtagagcacaactggttc
aatctgatagggatcatctgtgggctggccatctataacagcaccgtggtcgacctccac
ttccccctggtcctttacaagaagctactgggcgtagcacccactctggaggacctcaag
gagctgtcgcccacagagggcaggagtttacaacagctcctggaccatgaggaagatgac
gttgaggagacattttgtctaaactttgctatcaccagagagtactatggcctgacggag
gttaaggagcttatccctggaggagaccgcatcactgtggacaagaacaacagggaggag
tttgtggaggcctacctgaagtacatgttcagggactcggtgagcgagctgtaccaggcc
ttctcctctgggttcctgaaggtgtgtggtgggaagatcctgtcgctgttccagccctcc
gagcttatggccatggtggtgggaaacaacaactataactgggaggaaatggagaagaat
gcggtttacaaaggagagtattcagccactcatccgactgtgaggatgttttgggaagta
ttccatgagttccctctggaaaagaagaagcggttcttattattcctgacgggcagcgac
cgcatccccatccatgggatggagagcctccgcatcgccatccagtccacgtcggccgag
gagcactatctgcctgtggcccacacctgctacaacctgctggacatgccccgctaccag
accaaagagaccctgcaccgccgtctcacccaggccgtggagcagtacgagggcttcagc
ctggtgtga
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