Salvelinus namaycush (lake trout): 120038010
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Entry
120038010 CDS
T07522
Name
(RefSeq) transcription factor SOX-4-like
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120038010
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120038010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DDE_2
Motif
Other DBs
NCBI-GeneID:
120038010
NCBI-ProteinID:
XP_038839885
UniProt:
A0A8U0U5A4
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MVQKTSNVESSEAVFEGESSDSGAMDLDMASSPSPGSTASSAGDGKLNPAWCKTPTGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDCDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSSSSKPGEKEGKISGSNCNTSMKTSSKKSGSKSSSKPHKIVFGNS
TKTPSFPEQVIGTDHHSLYKSKSVSAAKQIPDKKKRVYVFGGSSLSHSVSPSSAAVPASP
TLSSSADSSEAVSFYEEVTASSRGGGESPSSVSEDYTSMRASSPTPSASHSSSSSQSSSS
DEEFEDDLLDINPSPGFDSMSLGSFGSSVLDRDLDFNFESGSGSHFEFPDYCTPEVSEMI
SGDWLESTISNLVFTY
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaagacaagtaatgtggagagctccgaggctgtgttcgagggagagtcgtcc
gattccggagctatggacctggacatggcatcctccccgagccccggctccacggcttct
tccgcgggggacggcaaactgaaccccgcctggtgcaaaacacccaccggtcacatcaag
aggccgatgaacgctttcatggtgtggtcacagattgaaaggcgtaaaattatggaacag
tcgccggatatgcacaacgcggagatatccaagagactgggcaagcgctggaagctgctg
aaagactgcgacaagatccccttcatacgagaggcggagcggctcagactcaagcacatg
gcggactacccagactacaagtaccggcccaggaagaaggtaaagtccagcagctccaaa
ccgggcgagaaggagggaaagatcagcggtagcaactgtaacaccagcatgaaaacatct
tctaaaaagagtggctcaaaatcatccagcaaacctcataaaatagtttttgggaacagc
accaaaacaccatcattcccagaacaagtcatcggcacagatcaccattctctttacaaa
tccaagtctgtttctgctgccaaacaaatacctgacaagaagaagcgtgtgtatgtgttc
gggggcagcagcctgagccacagtgtgagcccgtcttcagcagcggtgcccgccagtccc
acgctcagcagctcggcggattccagcgaagcagtcagcttttacgaggaagtaacagcc
agcagcagggggggcggcgagtctccctccagcgtctcggaagactacactagcatgcgg
gcgtcctcccctactccctccgcttctcactcctcgtcctcctcccaatcctcttcatca
gatgaggagtttgaggatgatctactggacattaaccctagccctggttttgacagcatg
tcgctgggaagctttgggtcctcggttttggacagagacttggattttaatttcgagtcg
ggctccggttctcactttgagtttcccgactactgcaccccagaggtgagcgagatgatt
tcaggagactggctagagtcgaccatttctaatttggtgttcacgtattga
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