Salvelinus namaycush (lake trout): 120038205
Help
Entry
120038205 CDS
T07522
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03420
Nucleotide excision repair
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120038205
09124 Replication and repair
03420 Nucleotide excision repair
120038205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
snh03051
]
120038205
03400 DNA repair and recombination proteins [BR:
snh03400
]
120038205
Proteasome [BR:
snh03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120038205
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120038205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
OTU1_UBXL
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
120038205
NCBI-ProteinID:
XP_038839995
UniProt:
A0A8U0QB25
LinkDB
All DBs
Position
3:74511705..74518361
Genome browser
AA seq
355 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPDQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSATAASTPSSEAPKAPVQDSGSSSSAGPALAAIPIPSEEPTP
TVAEPPAPASSDPSLEVQGGDASSALVTGAEYETMLTEIMSMGYERERVVAALRASFNNP
HRAVEYLLTGIPSSPVQETNPPAQLPASARTGTETPTVAEGENPLEFLRSQPQFQSMRQV
IQQNPSLLPALLQQLGRENPQLLQQISQYQELFIQMLNEPAGEVGDVPGVGDLGAAVEEG
APVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgttaaaaacactgcaacagcagaccattcaaattgacatagacccagat
caaacggtgaaggcactgaaggagaagatagaagcagagaggggaaaagataacttccca
gtgtctggacagaagctcatatatgctggcaaaatcctgcaagatgacacgcctattaaa
gactacaaaattgacgagaagaattttgttgtagttatggtatctaaggcaaagtctgcc
acagctgcttcaacaccttcctcagaggcacccaaggcccctgtccaggactctgggtcc
tcgtcgtctgccggcccggcccttgcagccatccctatcccctcagaggagcccacacct
acagtcgcagagcccccagctccagccagctcagaccccagtctggaggttcagggggga
gatgcctcctctgccttggtgacaggagcggagtatgagaccatgctgacagagatcatg
tctatgggttatgagagggagagagtggtagctgctctccgggccagcttcaataacccc
catcgggccgtggagtacctcctcactggcattcctagcagtccggtccaagagactaat
cccccagcacagcttcctgcatctgcccgcacaggcacagagacccctactgttgctgag
ggagaaaaccctctggagttcctgcgttcccagcctcagttccagagcatgaggcaggtg
atccagcagaacccctcactgctgccagctctgctccaacagctgggccgggagaaccca
cagctcctacagcaaatcagccagtaccaggagctgttcatccagatgctgaatgagccg
gcgggggaggtaggagacgtgcctggggtgggggacctgggtgctgcagtggaggaggga
gctccagtcaactacattcaggtcacgcctcaggagaaggaagccatcgagaggttaaaa
gcgttgggtttccctgaggcgctggtgatccaggcctactttgcctgtgaaaagaacgag
aacctagcggccaacttcctcctgaaccagggctttgaggatgaatga
DBGET
integrated database retrieval system
