KEGG   Salvelinus namaycush (lake trout): 120038949
Entry
120038949         CDS       T07522                                 
Name
(RefSeq) interferon a3-like
  KO
K05414  interferon alpha
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04060  Cytokine-cytokine receptor interaction
snh04217  Necroptosis
snh04620  Toll-like receptor signaling pathway
snh04621  NOD-like receptor signaling pathway
snh04622  RIG-I-like receptor signaling pathway
snh04623  Cytosolic DNA-sensing pathway
snh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    120038949
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    120038949
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    120038949
   04621 NOD-like receptor signaling pathway
    120038949
   04622 RIG-I-like receptor signaling pathway
    120038949
   04623 Cytosolic DNA-sensing pathway
    120038949
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120038949
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:snh04052]
    120038949
Cytokines and neuropeptides [BR:snh04052]
 Cytokines
  Interferons
   120038949
SSDB
Motif
Pfam: Interferon Exo84_C
Other DBs
NCBI-GeneID: 120038949
NCBI-ProteinID: XP_038840419
UniProt: A0A8U0U640
LinkDB
Position
Unknown
AA seq 175 aa
MYTMQSWTCIFLIICSMQSVCHCCDWIRHHYGHLSAEYLSLLDQMGGNITEQDAPVFFPE
SLYRPIDDAKFEDQVRFRNETIYQITKLFDGNMKSVTWDKKKLDNFLNILERQFENLKSC
VSPAKIPERRLKRYFKNLNRMVLRKMNYSALAWELIRKETKHHLERLDIFQAKIH
NT seq 528 nt   +upstreamnt  +downstreamnt
atgtatacaatgcagagttggacgtgtatttttcttattatttgcagtatgcagagcgtg
tgtcattgctgtgactggatccgacaccactacggccacttgagcgcagaatacctttcc
ctgctggaccagatgggaggaaatatcacagagcaggatgcccctgtctttttccccgaa
tcactttacagacccatagatgacgccaagtttgaggaccaagtcagattccggaacgag
accatctatcaaatcacaaaactgtttgatgggaatatgaaatctgtcacctgggacaag
aaaaagctggacaatttcctcaacattctcgaacgccaatttgagaaccttaagtcctgt
gtatcacctgccaagatacctgagaggagactgaaacgttacttcaagaatttgaatagg
atggtactgagaaaaatgaactacagtgcactggcatgggagctcatcaggaaagagacg
aaacatcatctggaaagattggatatttttcaggcaaagattcactga

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