Salvelinus namaycush (lake trout): 120039317
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Entry
120039317 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120039317
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120039317
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120039317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
120039317
NCBI-ProteinID:
XP_038840701
UniProt:
A0A8U0QA92
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQPSINTSETGEATGEPTEPVEGPEDPSNGDTLLDWLNTVRRT
GNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARADVGEGGEAPAEAPG
DGVEAVVGVEVQAGTEAGTEAVVGVEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAVVG
VEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAGTE
AGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTE
AGTEVPMETGEVLEEPVVEELAVIVEPEVEMEPEAEVEAEPELEAEMVPELVVEVVPQPP
SPVTTTPPVSRPASPLVQAPPSPPPEEPPRRGQRRARSRSPEQRRTRARTTRSRSPLTLD
RLDGLPRHVPNAAPSHSPPTLPPQAPAEGSSRTRQHVLSRQSTAEYEVQSAGTGSETAPE
PVTTPPQEGEAAGGEGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIANRTRSRSQNSNNTF
LYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQTMIRQIMTGFG
ELSYFMDSDSDSSDSNRGGGNPTGAADLAEALNTPDGGVAGMAEGAEPPVSVGGPSVGGA
GEARTEEGEEGVGVGLAPGIGLGVGGTPREGRARPRAPISLEEPGSLPFLRLAHFFLLND
EDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDR
WLSENSTCPICRRAVLVSANRESVV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggcccagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttattgagtcggctgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaaccgacagaaccggtggaaggt
ccagaggacccgtctaatggcgacaccctcttggattggctgaacaccgtcaggcggaca
ggcaacaccacccgcagtggtcaccgaggcaaccagtcgtggcgggcggtgagccggacc
aacccaaacagcggagacttccggttcagtctggagatcaacgttaaccgtaacctggct
gagcagcaggcccgcgccgatgtgggggaggggggggaagccccagcagaagcacctggc
gatggggtggaggcagtggtcggagtggaggtccaggcagggactgaggcagggactgag
gcagtggtcggagtggaggtccaggcagggactgaggcagtggtcggagtggaggtccag
gcagggactgaggcagtggtcggagtggaggtccaggcagggactgaggcagtggtcgga
gtggaggtccaggcagggactgaggcagtggtcggagtggaggtccaggcagggactgag
gcagtggtcggagtggaggtccaggcagggactgaggcagtggtcggagtggaggtccag
gcagggactgaggcagtggtcggagtggaggtccaggcagggactgaggcagggactgag
gcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggactgag
gcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggactgag
gcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggactgag
gcagggactgaggtgcccatggagacaggagaggtgctggaggaaccagttgtggaggag
ctggctgtcatagtggaaccagaagtggagatggagccagaggctgaagtagaagctgag
ccagaactagaagcagagatggtcccagagttagtagtagaggtagtcccacagccgccc
agccctgtcaccaccacccctcctgtctccagaccagccagtcccctggtgcaggcccct
cccagccctccccctgaggagcctccgcgacgtggccagagacgagcccgcagccgtagc
cccgagcagcgccggacaagggctcgcaccacacggagccgttctcccctcaccctggac
cgactggacggcctcccccgccacgtgcccaacgccgccccttcacacagcccccccacc
ctgcccccccaggcccccgcagagggaagctcacggactcgacagcatgttctgtcccgg
cagagcactgcagagtacgaggtccagtcagccggaacagggtctgagaccgccccagag
cccgttaccaccccaccccaggagggagaggccgcgggcggggagggagcagcaggacga
cgtccccccaccatcatgctggacctgcaggtgcgtcgtgttcgtccaggtgagtaccgc
cagagggacagcattgctaacagaacccgctcacgctcccagaactccaacaacaccttc
ctgtacgagagtgagagggggggattccgcaggaccttctcccggtccgagcgtgcgggt
gtgaggacgtacgtcagcaccatcaggatccccatcaggaggatcagtgacgcagggttg
ggagaggccacctccatggctctgcagaccatgatacgacagatcatgaccggcttcgga
gagctcagctacttcatggactcagactctgactcctcggactcaaaccgtggcggtggt
aaccccactggcgctgccgacctggccgaggcgctcaacactcccgacgggggagtagcc
ggtatggcggagggggcggagcctcctgtctcagtgggtgggcctagtgtgggaggagcc
ggggaggcaaggacagaggagggggaagaaggggttggtgtaggtctggccccagggata
ggtttaggggtggggggcacccccagggaggggcgagctcggccccgtgcccccatcagt
ttggaggaaccagggtcactacccttcctccgccttgctcacttcttcctcctgaatgat
gaggatgaggaacagcccagaggactcaccaaggagcagatcgacaacctctccaccagg
aactttggggagagtgatgctctgaagacctgcagtgtgtgtatcacagagtatgctgag
gggaacaagttgaggaagttgccctgttctcatgagtaccatgttcactgtatcgaccgc
tggctgtctgagaactccacctgtcctatctgccgcagggccgtgctggtgtctgctaac
cgggagagtgtggtctaa
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integrated database retrieval system
