Salvelinus namaycush (lake trout): 120039470
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Entry
120039470 CDS
T07522
Name
(RefSeq) cullin-4A-like
KO
K10609
cullin 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03420
Nucleotide excision repair
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120039470
09124 Replication and repair
03420 Nucleotide excision repair
120039470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120039470
03400 DNA repair and recombination proteins [BR:
snh03400
]
120039470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120039470
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
120039470
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120039470
TCR (transcription coupled repair) factors
Cul4-CSA complex
120039470
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120039470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
120039470
NCBI-ProteinID:
XP_038840789
UniProt:
A0A8U0U543
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MAEDIRQDKKANFSALTEHNNNGVTKISGLASNKTGASKKLVIKNFKDRPKLADNYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFR
EESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRNHI
VSDGPVQKRTVDGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFEERFLMETNRL
YAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPLISNVEKQLLGEHMTAI
LQKGLSILLDGNRVMELALLYQLFSKVKGGLPTLLQHWRDYIKSFGGEIVGTPEKDKDMV
QDLLDFKDKMDNVAQGCFNRNESFINAMKEAFEAFINNRPNKPAELIAKYVDCKLRAGNK
EATEEEMERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDVMIQFKQYTQNQSEPSQLELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMF
NEGEEFSVEEIKSATGIEEGELRRTLQSLACGKARVLNKTPRGKDIEDGDRFNFNNDFRH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLGHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacatacgacaggacaagaaagcaaacttctctgctctgacggagcacaac
aacaacggagtgacgaagatttctggcctggcctccaacaaaactggcgcctccaagaaa
ttagttataaaaaatttcaaagacaggccaaagctagcggacaactacactgaggacacc
tggctgaagctgagggatgcggtaggagccatccagaacagcacctccatcaagtacaac
ctagaggaactctaccaggcggtggagaacctgtgttcctataaagtctcccccacactg
tacaagcagctccgtcaggtctgtgaggaccatgtccaggcccagatacatcagttcaga
gaagagtccctggacagcctgtctttcctgaagaggatgaaccgatgctggcaggaccac
tgcagacagacgatcatgatccggagtatctttctgttcctggatcgtacctacgtgctc
cagaactccctgctcccctccatctgggataccgggctggaactcttccggaaccacatc
gtgagcgacgggcctgtccagaagcgcacggtcgatgggatcctggaacagatcgaacgt
gaacgcaacggagagaccgtggaccgcagccttctccgcagcctactgggcatgctctca
gatcttcaggtgtataaagagtcgtttgaggagcgttttttgatggagactaacagactg
tacgctgcagagggacagaggctgatgcaggaacgagatgtgccggagtacctgcatcat
gtggctcgtcggttggaagaagagaacgatcgtgtcatcagctacctcgaccagagcact
cagaagccacttatctctaatgtagagaagcagctgcttggagaacacatgacggccatc
ttacagaaaggtctcagtattctgttagatggtaaccgggtgatggagctggctctgctc
taccagctcttcagtaaggtgaagggaggactccccactctgctgcagcactggagagac
tacatcaagagttttggtggtgagattgtgggcaccccagagaaggataaggacatggtt
caagacctgttggactttaaggataagatggacaacgtggcccagggctgtttcaacaga
aacgagagcttcatcaacgctatgaaggaggcctttgaagctttcatcaacaacagaccc
aacaaacctgctgaactcatcgcgaagtacgtggactgtaaattgcgggcgggcaacaag
gaagctaccgaggaggagatggagagaattctagacaagatcatgatcatcttccgcttc
atccacgggaaggatgtgttcgaggccttttataagaaggacctggccaaacgcctgctg
gtggggaagagtgcctctgtggacgctgagaagtccatgctgtccaaactcaaacacgag
tgtggagcggccttcaccagtaagctggaggggatgtttaaggacatggagctctccaaa
gacgttatgatccagttcaaacagtacacccagaaccagagtgagcccagccagctggag
ctgacggtcaacatcctcaccatgggctactggccctcctacactcctatggaggtccac
ctgccccctgagatggtgaagctccaggaggtattcaagctgttctatctggggaaacac
agtggcaggaagctccagtggcagcccaccctgggccacgctgttctaaagactgagttt
aaagagggtaagaaggagctgcaggtgtctctgttccagacgttggtgcttctgatgttc
aacgagggggaggagttcagcgtggaggagatcaaatcagccactggcatagaggagggt
gagttgaggcgtaccctgcagtctctggcctgtgggaaggcgcgcgtcctcaataagact
ccccgggggaaggacatcgaagacggagaccgcttcaacttcaacaacgacttcagacac
aaactgttccgcatcaagatcaaccagattcagatgaaggaaacggttgaggagcaggtg
agcaccactgagcgtgtgtttcaggacagacagtaccagatcgacgcggccgttgtccgc
atcatgaagatgaggaagaccctgggccacaacctgttggtgtcagaactctacaaccag
ctcaagttccctgtcaagcctggagacctgaagaagcggattgagtcgctgatcgacaga
gactacatggagagagacaaggagagtcccaaccagtaccactatgtggcctga
DBGET
integrated database retrieval system
