Salvelinus namaycush (lake trout): 120039534
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Entry
120039534 CDS
T07522
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120039534
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
120039534
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
120039534
NCBI-ProteinID:
XP_038840876
UniProt:
A0A8U0QDU8
LinkDB
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Position
3:78878411..78883616
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AA seq
610 aa
AA seq
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MEIEGRDFMNTPPLKTVRFGGNVVATLAKFKQGDTSDYELLKHQLADPDIKDAQIINWLQ
EFRNCVTQLSKDHEQLIYVALRLPWLGRSPAVVEEYLAFLSNLVSAQTVYLRACLKMVVS
NFIPKRVKICEGGVDISDSDDDDENLPRSFDQCHQALQLIGRYVPSTSRFLVPILIENFP
FVQKSSRTLECYVHNLLRVAVYIPSLRRDVLELIISRMLKLDVSAPRGEIEEVEENAVQQ
EMKGEQEEEGLFDMDEDVCSVKSSPAGTNVMVHPVAERLDTLMVVLLAFIKDMCHVNGCL
DVERTKDLYKDLVCVFDKLILPTHASCHVQYALFYLCSFRLALAEAFLEHLWRLLQSLSH
PAVLRQSAAGYMGSFLARANFLPVATVRACLDLLVPWLHLYIASQDSGSRAYCDITLHGP
FYNACQAVFYTLIFRHRSILEGDMKKGLAYLQGLNLERIVMCQLNPLKVCLPAVTNMFAA
ITRKYQLVFCYTIIERNNRHVLPVVRSSVGGDCVSTNTNPLDSFFPFDPYMLKRSSKLIE
PLYQVWEEPADTITTKRVRQCSDADEDDFLRGETPETKGVMGMTPGSYESHLHSPSSVGS
PPISFLQRPF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaggggagagatttcatgaacactccccccttgaagacggtgcggtttgga
ggcaatgttgttgccacgttagcgaaattcaaacagggagacaccagtgactatgagttg
ttgaaacatcagctggcagatccagatatcaaggatgcccaaatcatcaactggctgcag
gagttccggaattgtgtgacacaactcagcaaagaccatgagcagctgatctatgtggct
ctgaggctgccgtggctgggtcgaagccctgccgtagtggaggagtatctggccttcctc
agtaacctggtatctgctcagacggtctacctccgggcctgcctcaagatggtggtctcc
aacttcatacccaagagagtgaagatctgtgagggaggagtggacatctctgactcggat
gatgatgatgaaaaccttccaagaagttttgaccagtgtcatcaggccctgcagctgatt
ggcagatatgtcccatccaccagccgtttcctggtgcccattctgattgaaaactttccc
tttgtgcagaaatcttccagaaccctggagtgttatgtccataaccttctgcgggtggcg
gtgtacatcccctctctacgacgagacgtcctggaactcatcatcagtaggatgctcaaa
ctggacgtgagtgctcctcggggagagatagaggaggtggaggagaacgctgtgcagcag
gagatgaaaggagagcaggaagaggagggcctctttgacatggatgaggatgtgtgttca
gtgaagtccagtccagcagggaccaatgtgatggtccaccctgtcgctgagagactggac
actctcatggttgtgctgctggccttcatcaaggacatgtgccacgtcaacggttgtctg
gatgtggagcggactaaggatctatacaaggacctggtgtgtgtgtttgataaacttatc
ctacctacacacgcctcctgtcacgtccaatacgccctcttctacctctgcagcttcaga
ctggctctggcagaggcgtttctggaacacctgtggaggttactgcagagcctgtctcac
ccggcagtactgcgccaatctgccgctggctatatgggtagcttcctggcccgtgccaac
ttcctgcccgtcgctacggtgcgtgcgtgtctggacctgctggtcccctggctccaccta
tacatagccagccaggactccggctcccgggcctactgtgacatcacgctacacgggccc
ttctacaacgcctgccaggctgtcttctacacactcatcttcagacacaggagcatcctg
gagggcgacatgaagaaagggctggcgtacctgcagggtctgaacctagagaggatagtg
atgtgtcagctcaaccctctgaaggtctgcctgcctgccgtcaccaacatgtttgctgcc
atcaccagaaagtaccagttggtgttctgctacaccatcatcgagaggaacaaccgccat
gttctccccgtggtccgcagctccgtggggggcgactgtgtgtccaccaacaccaacccc
ctggacagtttcttccccttcgacccctacatgctcaagaggtcaagtaaactcatcgag
cccctctaccaggtgtgggaggagccagcagacaccatcaccaccaagagagtcagacag
tgctcggatgcagatgaggatgacttcctgcgaggggagacgccggagacaaagggggtg
atgggtatgacccctggctcgtatgagtcacacctccacagccccagcagtgtgggctca
ccgcccatctccttcctacagagacccttctga
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