Salvelinus namaycush (lake trout): 120039738
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Entry
120039738 CDS
T07522
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh04261
Adrenergic signaling in cardiomyocytes
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120039738
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120039738
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120039738
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120039738
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120039738
03036 Chromosome and associated proteins [BR:
snh03036
]
120039738
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120039738
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120039738
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120039738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
120039738
NCBI-ProteinID:
XP_038841065
UniProt:
A0A8U0QD84
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
PKGELEQVGETGESGEYNVYSTFQSHEPDFDYLKSLEIEEKINKIRWLSQQNAAHFLLST
NDKTIKLWKVSERDKQPEGYNLKDEEGRMKDISTVTSLQVPVLRPTDLMVEVRPRRVFSN
GHTYHVNSISVNSDGETYLSADDLRINMWHLGITDRSFNIVDIKPANMEELTEVITAAEF
HPHHCHLFVYSSSKGTLRLCDMRASALCDKHTKLFEEPEDPGSRSFFSEIVSSVSDVKFS
HNGRYLLTRDYLTAKVWDLHMEKGPVETYQVHDYLRTKLCSLYENDCIFDKFECVWNSSD
SVIMTGAYNSFFRMFDRETGRGVTLEAWRETSKPRAVLRTRRIYTGGKRRRGDVGVDSLD
FTKKILHMAWHPEENIIAIASTNNLYIFQDRVSPDTHGPDLGSNTI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
cctaaaggggagttggagcaggtgggggagacgggggagtcgggggagtataatgtgtac
agtaccttccagagccacgagcctgactttgactacctgaagagtctggagatcgaggag
aagatcaacaagatacgatggctgtcacagcagaacgccgcccacttcctgctctccacc
aacgataagaccatcaagctgtggaaggtgagtgagcgagacaagcaaccggaaggctac
aacctgaaagatgaggagggcaggatgaaggacatctctacagtcacatcactacaggtt
cctgtgttgagacctacagacctgatggtggaggtgcgtcctaggagggtgttctccaat
ggtcatacctaccatgttaactccatatcggtcaacagtgacggagagacgtacctgtca
gctgatgacctgaggatcaacatgtggcatctggggatcacagaccgcagcttcaacata
gtggacatcaagccagccaacatggaggagctaactgaggtgataacagcagcagagttc
catcctcaccactgtcacctgtttgtctacagtagcagtaagggaactctacgtctctgt
gacatgagggcctcggcactttgcgacaaacacaccaaactctttgaggaaccagaggac
ccaggaagtcgttcattcttctctgagatcgtgtcgtcggtgtcggatgtgaagttcagt
cacaacgggcggtacctgctgaccagggattacctgacggccaaggtgtgggacttacac
atggagaaaggccctgtcgaaacctaccaggttcatgactacctgaggactaagctgtgc
tctctgtacgagaacgactgcatatttgacaagttcgagtgtgtctggaacagctccgac
agcgtgataatgacgggggcgtacaacagcttcttccggatgtttgacagggagacgggg
cggggcgtgaccctggaggcgtggcgagagaccagtaagccgcgagctgtactgcggacg
cgacggatctacaccgggggcaagcgtcgtcgcggcgacgtgggggtggacagtctggac
ttcactaagaagatcctccacatggcctggcaccccgaggagaacatcatcgccatagcc
tccaccaacaacctctacatcttccaggaccgggtcagccccgacacacatggtccagac
ctgggttcaaataccatttag
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