Salvelinus namaycush (lake trout): 120040201
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Entry
120040201 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 5-like
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120040201
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120040201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SLX1_C
Motif
Other DBs
NCBI-GeneID:
120040201
NCBI-ProteinID:
XP_038841374
UniProt:
A0A8U0U5P4
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MPERQDTPLGALPLQRRCPRCGDVLEWSREQSAPLACRCYSQLDEGTRRGHWATGRVGNM
DFTDTSRTRGKGAIPLQRRCPRCGDVLEWSREQSALLACRCYSQLDEAVESVAEGRGRGA
SRGDKERGHWAAGRVGDIDFTGTSRTRGKFVRVHSSTDPVLIYQMLTEQWGLAPPHLVVA
LVGGDELAQMKPWLRDTVRKGLVKAAQSTGAWILTNGLRFGITKHLGQAVRDHSLASTSS
KVKVVAIGIAPWNMIHHRDALLAAKPDQPAVVEPQDLPHGAVYSLDCNHSHFVLVEEDPQ
RPGATSDMRVKLLKHISLQRTGYGGAGSFEIPVLCLLVHGEPRILQRMYRGIGNAMPWLI
LAGSGGVADILVTLMNRGCWDMDSVQELLLDTFPSVHHSTDITNWTKLIQKILDNGHLLT
VHDPEQESSELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSHIFNGDVEW
TAGDLEEVMMDALVNDKPDFVRLFVDNGVCLGEFLTYGRLQELYCSVSEKSLLHLLLMKK
HQEKQLLLKATRTPGPPHDHHKAEPGDRKARFTLHEVSKVLKDFLHDSCKGFYQKLPTEK
TGKKAGRLFNNQKSLAELEERCEHPWRDLFLWAVLQNRQQMANYFWAMGPEAVAAALAGC
KILKEMSGLESEAESARSMKEAKYEQFALDLFGECYSNSEDRAYALLVRRTRCWNQSTVL
NLATEADAKCFFAHDGVQGFLTKIWWGAMTTDTAISKLVLSFFCPPLIWTNLIKFSDEEL
DSRGGGEEQYVELDSLDTEKALLLTDNDPLXGQSSAAVWWRFLLRRWRRFWSAPVTVFLG
NVIMYFAFLILFTYVLLLDFRPPPPAGPGAPEIMLYFWVFTLVLEELRQSFFTDEDMSIL
KKFKLYVEDNWNKCDMVAISLFVISVSCRMMKDTYEAGRTVLALDFMVFTLRLIHIFAIH
KQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNDPRLDWVFRRVLYRPYLH
IFGQIPLEEIDVARMPETNCTTVIEEIIMGTLPPCPNIYANWLVILLLVIFLLVTNVLLL
NLLIAMFSYTFQVVQGKTDIFWKFQRYNLIVEYHSRPALAPPFIIISHCSQLLLSLVKRP
EPKLEQL
NT seq
3442 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcgacaagacacgcctctgggggcgctgccgctgcagagacgatgcccacga
tgcggggatgtactggagtggtcacgggagcaaagtgctccgttggcctgccgttgctac
tctcagctggacgaggggacaaggaggggtcactgggcaacaggacgagtggggaacatg
gacttcactgacaccagtaggacaaggggaaagggggcgataccgctgcagagacgatgc
ccacgatgcggggatgtactggagtggtcacgggagcaaagtgcgctgttggcctgccgt
tgctactctcagctggacgaggccgtggagagtgtggcagaaggccgaggccgaggtgct
agcagaggggacaaggagaggggccactgggcagcaggacgagtgggggacattgacttc
actggcaccagtaggacaaggggaaagtttgtgagggttcacagctccacagatccagtg
ttaatctaccagatgctgacagagcagtggggactagcccctccacacctggtggtggct
ctggtggggggagacgagctggctcagatgaaaccctggctcagggacaccgtgaggaaa
ggactggtcaaggctgctcagagcacaggtgcctggatcctgaccaacgggcttcgcttc
ggcatcaccaagcacctgggccaggctgtccgggaccactctctggccagcacctcctct
aaggtcaaggtggtggccatcggcatcgctccctggaacatgatccaccacagagacgcg
ctgcttgctgctaagccagaccagcctgccgtggtggagccccaggacctgccccatggg
gcggtgtactccctggactgcaaccactcccactttgtcctggttgaggaggaccctcag
cgccccggtgccaccagcgacatgagagtcaagctgctgaagcacatctccctgcagcgc
accggttacggaggtgcaggtagttttgagatcccagtgctgtgtctcctggtgcatgga
gaaccccggatcctacagaggatgtataggggtatagggaacgccatgccctggctgata
ctggcggggtcggggggtgtggccgacatcctggtcacgctgatgaaccggggctgctgg
gacatggacagcgttcaggagctcctgctagacacctttcccagcgtgcaccacagcact
gacatcaccaactggaccaagctgatccagaagatactggacaacggccacctcctgaca
gttcatgaccccgagcaggagagctctgagctggacacagtcatcctcaaagccttggtc
aaagcctgtaagagccagagtcaggaagctcaggacttcctggatgagctgaagttggcg
gtggcctggaaccgggtggacatcgctaagagccacatcttcaacggggacgtggagtgg
acggcaggtgacctggaggaggtgatgatggacgcgctggtcaatgacaagcccgacttt
gtgcgtctatttgtggacaacggcgtgtgtctgggcgagttcctgacctacggccgccta
caggagctctactgctccgtgtcagagaagagcctccttcatctcctcctcatgaagaag
caccaggagaaacagctcctactgaaggcaacacggacccctggaccccctcacgaccac
cacaaggccgagcccggggaccggaaggcccgcttcaccctgcacgaggtgtccaaagtg
ctgaaagacttcctgcacgactcgtgtaaaggcttctatcagaagctgcccacggagaag
acaggcaagaaggcaggccgtctgtttaacaaccagaagagcctggctgagctggaggag
cgctgtgagcacccctggagggacctgttcctctgggctgttctccagaaccgccagcag
atggctaactacttctgggccatgggtcctgaggctgtagctgcagctctagctggttgt
aagatcctgaaagagatgtctggcctggagtcagaggcagagtcagcacgcagcatgaag
gaggccaagtatgagcagtttgccctagatctgtttggggagtgctactctaacagtgag
gacagggcctatgctcttctggtgagaaggacccgctgctggaatcaatccaccgtcctc
aacctggcaaccgaggctgacgccaagtgcttcttcgcccacgatggagttcaggggttc
ctcactaagatctggtggggggcgatgactacagacacagccatctccaaactggtgctg
tctttcttctgtccccctctcatctggaccaacctcatcaagttcagtgatgaggagcta
gacagtcgtggtggaggagaggagcagtatgtggaactagacagtctggacacagaaaag
gccctgctactaacagacaatgaccctttgtgaggccagagcagcgccgccgtgtggtgg
cgtttcctgctgcgtcgctggcgtcgcttctggagtgccccggtcactgtgttcctaggc
aacgtcatcatgtactttgctttcctcatcctgttcacctacgtgctcctgctggacttt
cgtcctccgccccccgcgggccctggggcccctgagatcatgctctacttctgggtcttc
accctggtgctggaggagctgagacagagtttcttcacagacgaagacatgagcatcctg
aagaaattcaagctgtacgtggaggacaactggaacaagtgtgacatggtggccatctca
ctcttcgtaatcagtgtgtcctgcaggatgatgaaagacacgtatgaggcaggacgaacg
gttctggcgctggacttcatggtgttcacactgcgtctcatccacatcttcgccatccac
aagcaactggggcccaagatcatcattgtggagaggatgatgaaggatgtgttcttcttc
ctgttcttcctgagtgtgtggctcatagcgtacggcgtggctactcaggcccttctccac
cccaacgacccgcgcctagactgggtgtttcgcagggtcctgtatcgaccctacctgcac
atctttggccagatcccactggaggagattgacgtggcacggatgcccgagaccaactgc
accacagtgatagaggagatcatcatgggaactctgcccccttgtcccaacatctacgcc
aactggctggtcatcctactgctggtcatcttcttactggttaccaacgttctgctgctc
aacctcctcatcgccatgttcagctacacgttccaggtggtgcagggcaagacagacatc
ttctggaagttccagaggtacaacctgatcgtggagtaccacagccggcctgccttagcc
ccgcccttcatcatcatcagccactgctcccagctgctcctcagcctggtcaagaggcct
gagcccaaactggagcaactag
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