Salvelinus namaycush (lake trout): 120040330
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Entry
120040330 CDS
T07522
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120040330
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120040330
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Med25
VWA
Motif
Other DBs
NCBI-GeneID:
120040330
NCBI-ProteinID:
XP_038841452
UniProt:
A0A8U0QDR9
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Position
Sna3:complement(80716234..80731363)
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AA seq
727 aa
AA seq
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MDLPIKPGANQVADVVFVIEGTANLGPYFESLRKHYILPAIEYFNGGPPAETDFGGDYGG
TQYGLVVFNTVDCAPESYVQCHAPTSSAFEFVSWIDSIQFMGGGAESCSLIAEGLSVALQ
LFDDFKKMREQIGQTRKVCVLLCNSPPYLLPAVESVSYTGCTADNLVKIIRDRGIHFSVV
SPRKLPALRALFDRASPVGGPVDPHPDYSQDPFHMILVRGISLPVSSGGGSGPLKPILPP
QPLPVSQPPLGPTSQAPPPISTAHPYQPPSSLNAAQAAAQMAVEAANNQKSRFPGMVNPG
PPFSGQSTLPSVAGVKLAPSSQPSLSTVTTVSTPMLPQQQAPPPQQQQVQPPGQPQPNQQ
QPVPPQQQQPTANQQTPPSSQPGMPGVSAAQANPIGGQQQGVANKIVAWSGVLEWQEKPK
ASSMDSNTKLTRSLPCQVQVNQGENLNADQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQF
LFTNKDVESLKGLYRIMATGFAGCVHFPHSAPCEVRVLMLLYSSKKRIFMGLIPNDQSGF
VNGIRQVITNHKQVQQHRSLGSGGPMPGPPGQVQPNQNFLNRPQGPIPVSHGNVQQQMTM
RASGAPNQPVTGAPPNQVTQGGQAPPQGAMLRLPNPGANPQLRSLLLSQQQPQGGVGHMQ
GMMPHQGLGGQLVHPTPGAGPQMQAQWRQPLAGQMMMAAGQRGPGAQPPGMPQVSSVMED
EILMDLI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcctattaaacctggcgccaatcaagtggcagacgtggtgttcgtcatcgaa
ggaactgcaaacctcggcccctattttgaatccctcagaaaacattacatattacctgca
atcgagtacttcaatggaggccctccagcagagacagactttggaggagattatggaggc
acacagtatggtcttgttgtgttcaacacagtggactgtgctcctgaatcctacgtccag
tgtcacgcaccaaccagctcagcctttgagtttgtctcatggattgacagcatccagttc
atgggaggaggagcagagagctgtagtctcatcgcagagggtctgtctgtggccttgcag
ctctttgatgacttcaaaaagatgagggagcaaataggtcagacacgcaaagtctgtgtg
ctgctgtgtaactctccgccatacctgctccctgccgtggagagtgtcagctatacgggc
tgcactgcagacaatctggtcaagatcatcagagacagagggattcatttttctgtggtg
tcgccacggaaactgccagcgttacgggcgctgttcgatagggcgtcaccagtcggggga
ccagtcgacccccacccagactacagccaagaccccttccacatgatcctggttaggggt
atctcacttcctgtgtcatcagggggaggatcgggccctctcaaaccaattctaccccct
caacccctgcctgtcagtcagcctcctcttggtcccacctcacaggctcctccaccaata
agcacggcccatccatatcagcccccatcttcccttaacgcggctcaggcagctgcacag
atggctgtagaggcagccaacaaccagaagagtcgcttcccaggcatggtcaatcctggt
cccccattcagtggtcagtcaactctcccatctgtagcaggagttaagttggctccctcc
agtcagcccagcctatccacagtcaccacagtttccacacccatgttgcctcagcaacaa
gcccctcccccgcagcagcaacaagtccagccgccaggacaaccacagcccaatcagcag
cagccggtgccccctcagcagcagcagcccacagccaatcagcagacgcccccatcctca
cagcctggcatgcctggtgtgtctgcagcccaggcaaatccgattggggggcagcagcaa
ggcgttgccaataagattgtagcatggagtggggtgctggagtggcaagagaagcccaaa
gcctcgtctatggattccaataccaaactcactcgctccctgccctgccaggtgcaagtc
aaccaaggagagaacctaaatgccgaccagtggccacagaagctcatcatgcaattgatc
ccacaacagctactgacaacactcggtcccctcttcagaaactctagaatggttcagttt
ctcttcaccaacaaagatgtggagtcactaaaaggtctttatcgtatcatggccactgga
tttgcggggtgcgttcacttcccccacagcgccccctgtgaggtgcgggtgctcatgctg
ctctactcctccaagaagaggattttcatgggcctcatccccaacgaccagagcggcttc
gtcaacggcatccgacaggtcatcaccaaccacaaacaggtccagcagcaccgctcgttg
ggttcaggagggccgatgccagggccacctggccaggttcaacccaatcagaacttcctc
aaccggccgcaggggcccatccctgtctcccatggcaacgtgcagcagcagatgacgatg
agagcatccggcgcacctaatcagcctgtcaccggtgctccacccaaccaggtcactcag
ggtggacaggccccaccccagggtgccatgctccgcctaccaaacccaggagccaatccg
cagctgcgcagtctcctcctcagccaacagcagccacagggtggtgttggtcacatgcag
ggcatgatgcctcaccaggggctgggagggcagctggtccaccctactccaggagcgggc
ccccaaatgcaggcccagtggagacagcccctagcaggtcagatgatgatggctgctggt
cagaggggccctggagcccagccccccgggatgccccaggtgtcttccgtcatggaggat
gagattctcatggaccttatttga
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