Salvelinus namaycush (lake trout): 120040350
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Entry
120040350 CDS
T07522
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh04261
Adrenergic signaling in cardiomyocytes
snh04382
Cornified envelope formation
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120040350
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120040350
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120040350
09158 Development and regeneration
04382 Cornified envelope formation
120040350
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120040350
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120040350
03036 Chromosome and associated proteins [BR:
snh03036
]
120040350
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120040350
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120040350
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120040350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
120040350
NCBI-ProteinID:
XP_038841466
UniProt:
A0A8U0QBS0
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MEEETDTRKINNSFLRDHNYATEADIISTVEFNPSGELLATGDKGGRVVVFQREQGTKSE
PQKRGEYNVYSTFQSHDPEFDYLKSLEVEEKINKIRWLPQQNSAYFLLSTNDKTVKLWKI
RERDRRPEGYNLKDEDGRIRHPSTITSLRVPVLQNSDLMVEATARRVFSNAHTYHINSIS
VNSDLQTYISTDDLRVNLWNLEITDQSFNIVDIKPCNMEDLTEVITAAEFHPQQCNTLAY
SSSRGSVRLCDMRKQALCDTHCKFFDEPEDPSTRSFFSEIISSISDIKFSHSGRFLMTRD
YLTVKVWDLNMETRPVQTYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNN
FFRMFDRNTKKDVTLEASRENSKPRAILQPRKVCVGGKRRKDEVTVDSLDFSKKILHSTW
HPQENIIAVAASNNLYIFQDKVT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagactgacacccgcaagatcaacaacagcttccttcgcgaccacaactat
gctactgaagctgacatcatctccacggtggagtttaacccttcgggggagctgctggcc
acaggggacaaaggaggaagagtggtggtcttccagagagaacaggggactaaaagcgag
ccccagaagcgaggggagtataatgtgtacagtacgttccagagtcatgatccagagttt
gactatctgaagagtctggaggtagaagagaagatcaacaagatcagatggctgccgcag
cagaactctgcctacttcctcctctccaccaacgataagacagtgaagctctggaagatt
cgtgagagagacagacgaccagagggatacaacctgaaggatgaagacggacgaatcaga
cacccatccacaattacctcattacgggtgcctgtcctccagaactcagatctgatggtg
gaggcgacagcgcggcgtgtgttcagtaacgcccacacctaccacatcaactccatctcc
gtgaactctgacctccagacctacatctccacggacgacctcagggtcaacctgtggaac
ctggagatcactgaccagagcttcaacattgtggacattaagccgtgtaacatggaggat
ctgacagaggtgattacagcagcagagttccatcctcagcagtgcaacaccttggcttac
agcagcagtagagggtcagtacgactctgtgacatgaggaaacaggcgctctgcgacaca
cactgcaagttctttgatgagccagaggacccctccactcgttcatttttctcagagatc
atctcttccatctcagacatcaagtttagtcacagcgggcgcttcctgatgacacgggac
tacctgacggtcaaggtgtgggacctcaacatggagaccagaccggtccagacataccag
gtccatgactacctgaggggtaagctgtgttctctgtacgagaacgactgcatcttcgac
aagtttgagtgtgtctggaacgggtcagacagtgtcattatgacggggtcatataataat
ttcttcaggatgtttgatcggaacaccaagaaagatgtgactctggaggcttccagagag
aacagcaaaccccgggccatcctccaaccacgcaaggtgtgtgtgggagggaagcgtcgt
aaagacgaggtgactgttgacagtctggatttcagtaagaaaatcctccactccacctgg
cacccacaggaaaacatcatcgccgtggcagccagtaacaacctttacatcttccaggac
aaggtcacctag
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