Salvelinus namaycush (lake trout): 120040476
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Entry
120040476 CDS
T07522
Name
(RefSeq) vacuolar protein sorting-associated protein 37B-like
KO
K12185
ESCRT-I complex subunit VPS37
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120040476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120040476
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120040476
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
120040476
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120040476
Exosomal proteins of colorectal cancer cells
120040476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
ApoLp-III
Glyco_hydro_63
VbhA
Motif
Other DBs
NCBI-GeneID:
120040476
NCBI-ProteinID:
XP_038841565
UniProt:
A0A8U0U6U1
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All DBs
Position
Sna1:34811930..34843720
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AA seq
275 aa
AA seq
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MSGFWNKFSSYSMTQLNEMLEDDDKFNTIIQEMEEMQEVQQIKEMILASNRSLAEQNLQL
QPSLEHQKSQLTKCYSSLQESFEAYHVHKSKLDHTSGNSSLETLLALLQAEGAKIEEETE
NMADSFLDGDVTLDTFIDSYQSKRKLAHLRRVKIDKLQEMVLKGHRLPQVPVSCSHPQEV
SARPAPLYTEVNNHSPVPQPRRAPPPPPAQQPPGVAPQPAVFSYPAIPYPPIPPRAAHLL
PSVNPAHQHHFMSQCPPVLPQRPPPRMAPQSGFMI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtttttggaacaagtttagctcctactcgatgacgcagctcaacgaaatgctt
gaagatgatgacaaatttaacacaattattcaagaaatggaagagatgcaggaggtgcag
cagatcaaggagatgatcctggccagtaatcggagcctggcagagcagaatcttcaactg
cagcccagcctggaacaccagaagagccagctcaccaaatgctacagctcactacaggag
agctttgaggcctaccatgtccacaagtccaaactagaccacacctctgggaacagttca
ttggaaacattgctagctctactgcaggcagagggagccaagattgaagaggagactgag
aacatggccgactccttcttggatggcgacgtcaccctggataccttcatagactcgtac
cagagcaagaggaagctggcccacctgaggagggtgaagattgacaagttgcaggagatg
gtgctgaagggccataggctgccccaggtgccagtctcttgctcccatccccaggaggtc
tcagccaggccagcccccctctacacagaggtcaacaaccactcccctgtgccccagccc
aggagagccccccctccccctccagcccaacaacccccaggtgtagccccccagcctgct
gtcttctcctatcctgccatcccatacccccctatcccccccagggcagcccaccttttg
cccagtgtcaacccggcacaccagcaccacttcatgtctcagtgcccccctgtccttcct
caaaggcctccccctcgcatggccccgcagtctggcttcatgatttag
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