Salvelinus namaycush (lake trout): 120040589
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Entry
120040589 CDS
T07522
Name
(RefSeq) coiled-coil domain-containing protein 47 isoform X1
KO
K24962
PAT complex subunit CCDC47
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
snh03110
]
120040589
04131 Membrane trafficking [BR:
snh04131
]
120040589
Chaperones and folding catalysts [BR:
snh03110
]
Other chaperones and cochaperones
Others
120040589
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
120040589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
120040589
NCBI-ProteinID:
XP_038841605
UniProt:
A0A8U0QEC8
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Position
Sna3:complement(81223534..81228361)
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AA seq
556 aa
AA seq
DB search
MHAVNSKALLRYKVVFNEHERVSVCHFHKVGVITYLTTYNIGFNLGCVFRFREKQQQGRI
FDFSNPGPASTMRSVYLLLPALLLLLALPVSRGRYNDDFDDGEDLADFADDNDFAEFEDV
SEDTAAEPETAPPPRAAQPAEDDEDEATVELEEDGQEDGFEDSDTQDQDMYSKYDPDEFD
GMEKPSQSLKDPLIIHTVPAHLQNSWESYYMEILMVTGLLAYIMNYIIGKNKNSRLATAW
FNSHRELLESNFALVGDDGTSKDAVSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFVKR
QDLLNVLARMMRPVCDQVQIKVTLNDEDMDTFVFAVGTKKAMARMQKEMQDLSEFCSDKP
KSGAKYGLPELLAILTEMGEVTDGVMDSKMVHYITNHADKIESIHFSDQFSGSKVVQEDG
QPLKLPETKKTLLFTFNVPGMGNTSPKDMDTLLPLMNMVIYSIDKVKKLRLNREGKQKAD
KNRARVEENFLKQTHNQRQEAAQTRREEKKRAEKERIMSEEDPERQRRLEEAAQRRDQKK
IEKKQMKMKQIKVKAM
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccgtcaactcaaaggcacttcttcgctataaagttgtttttaacgaacatgaa
agagtgtcagtttgtcactttcacaaggttggagtaataacatatttaactacttacaac
attggctttaatctaggctgtgtctttagatttcgagaaaaacaacaacaaggaagaata
tttgacttctcaaaccccggccctgcttcaaccatgaggagtgtgtacctcctgctgccc
gcgctgctacttctcctggcactgcccgtctccaggggacgctacaacgatgactttgac
gatggggaagacctggcagactttgcagatgacaatgactttgctgagtttgaggatgtg
agcgaggacactgcggccgagccagagacagcccctccaccccgtgcggctcagcctgct
gaggatgatgaggacgaggccacagtggagctggaggaagacggacaggaggacggcttt
gaggattccgatacacaggatcaagacatgtacagcaagtacgatccagacgagtttgat
ggcatggagaagcccagccagtcccttaaagaccctctgatcatccacacagtgccggcc
caccttcagaacagctgggagagctactacatggaaattctaatggtgacgggcctgctg
gcctatatcatgaactacatcatcggcaagaacaagaacagccgtctggccacagcctgg
ttcaactcccaccgagagctcctggagagcaactttgccttggtgggtgacgatggcacc
agtaaggatgcagtgagcaccgggaagctgaaccaggagaatgagcacatctacaacctg
tggtgctcaggtcgagtgtgttgtgaaggcatgctcatccagcttaagtttgtgaagagg
caggacctgctgaatgtactggccaggatgatgaggccagtctgtgatcaagtgcaaatc
aaagttactctgaatgatgaggacatggatacgtttgtgtttgctgtgggcaccaaaaag
gccatggcccggatgcagaaagagatgcaggacttgagtgagttctgcagtgacaagccc
aagtcaggagcaaagtacggccttcctgagctcctggccatcctgacagagatgggtgag
gtcacggatggtgtgatggacagcaagatggttcattatatcaccaaccatgctgacaag
atcgagtccatccatttctctgaccaattttctggttcaaaagttgtgcaagaggatgga
cagcccttaaagctgcctgagaccaagaagacgctgctgtttacatttaatgtgcctggc
atggggaacacgtctcccaaagacatggacactctgctacccctgatgaacatggtcatc
tacagcatcgacaaggtcaagaagctccgcctcaacagagagggaaaacagaaggcggat
aagaaccgtgcccgtgtggaggagaacttcctgaagcagacccacaatcagcgccaggag
gctgctcagacccggcgggaggagaagaagagggctgagaaggagaggatcatgagtgag
gaggatcctgagagacagcgccgcctggaggaggctgctcaacgtcgtgatcagaagaag
attgagaagaagcagatgaagatgaagcagatcaaagtcaaagccatgtga
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