Salvelinus namaycush (lake trout): 120040606
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Entry
120040606 CDS
T07522
Name
(RefSeq) DDB1- and CUL4-associated factor 7-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120040606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120040606
03036 Chromosome and associated proteins [BR:
snh03036
]
120040606
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120040606
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
120040606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_WDR3_2nd
MIOS_WD40
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
WD_LRWD1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
120040606
NCBI-ProteinID:
XP_038841624
UniProt:
A0A8U0QGU5
LinkDB
All DBs
Position
Sna3:81228944..81235625
Genome browser
AA seq
342 aa
AA seq
DB search
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQIVGLEEESSEFI
CRNTFDHPYPTTKIMWIPDSKGVYPDLLATSGDYLRIWRVSETETRLECLLNNNKNSDFC
APLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
AFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM
AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMP
RAIEDPILAYTAEGEINNVQWASTQPDWIAIGYNNCLEILRV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccacggtaagcgaaaagagatctacaaatacgaagcgccatggacggtgtat
gcaatgaactggagcgttcgtcccgacaaacgctttcgcctggcccttggaagtttcgtt
gaagaatataacaataaggtgcagattgtgggtctggaggaggagagttcagagttcatc
tgcaggaacacctttgaccacccctaccccaccaccaagatcatgtggatcccagacagc
aagggtgtttacccagacctgcttgccactagcggggactacctgcgcatctggagggtc
agtgaaacagagacgcgtttggaatgcttgctgaataacaacaagaactctgacttctgt
gccccactcacctcgtttgactggaatgaagtggatcctaatctgctgggcacctccagc
attgacaccacttgtactatctgggggttggagactggccaagtgctgggcagagtcaac
ctcgtatccggccacgtcaagacccagctcattgctcatgacaaagaggtgtatgacatc
gcgttcagccgcgcaggcggtggtcgggacatgtttgcgtcggtcggagcggacggctca
gtacgcatgtttgacctgcggcacctggaacacagcaccatcatctatgaagatccccag
caccaccccctactgcgcctctgctggaacaaacaggaccccaactacctggccaccatg
gctatggacggcatggaggttgtgattctggacgtgcgtgttccctgcacgccggtggcc
cgcctcaacaaccaccgggcctgtgtcaacggcatcgcctgggctccccactcctcctgt
cacatctgcactgcagccgacgaccaccaggcgctgatatgggacatccagcaaatgccc
agggccatcgaggaccctattctggcctacacagccgagggggagatcaacaacgtccag
tgggcctccacccagcctgactggatcgccatcggctacaacaactgcctagagatcctg
cgggtctaa
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integrated database retrieval system
