Salvelinus namaycush (lake trout): 120040669
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Entry
120040669 CDS
T07522
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
snh04054
]
120040669
Pattern recognition receptors [BR:
snh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120040669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
PYRIN
DUF7639
Motif
Other DBs
NCBI-GeneID:
120040669
NCBI-ProteinID:
XP_038841675
UniProt:
A0A8U0QE64
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MHLSGGHDTKAKSPIKQERPASPVPSCVSMKSDESMDHPILFREGDFSTEQSPIKQERPA
SPVPSCVSMKSDESMDHPILFREGDFSTEQSPIKQERPASPVPSCVSMKSDESMDHPILF
REGDFSTEQSPIKQERPASPVPSCHFVSGLTHLLNLFQMLEEKIMTFVKNELKMFKRILS
PELPEGFESQKQDKEVVDAEDEKQESSAREGALKITLHVLRKINQKELADTLEKYELAVI
CQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEGGTGEVNKEHELRQIETTTR
KQARPETAIKCNDIFKLLTGQDKRIRSVLTKGVAGIGKTVSVQKFILDWAEGKANQDVQF
VFSFPFRELNLMKGDKYTFIELLNHFSMETKQSGFSIYNKYKVLFIFDGLDECRLPLDFQ
KNKICWDVTESTSVDVLLTNLIKGNLLPSALLWITTRPAAANKIPSVCVDQVTEVRGFND
PQKEEYFRKRFSDEDLASRIISHIKTSRSLHLMCHIPVFCWISATVLEHMLKHKREEMPK
TLTEMYTHLVVFHTKQKNEKYLGKEETGPHWNKESILSLGKLAFQQLVNGNLIFYEEDLK
EAGIDVNEASVYSGLCTQLFKEECGLYQDKVYCFVHLSIQEFLAAVYVFLSFINNNENLM
DKLQTNNKSEITFYKSAVDKALQSETGNLDLFLRFLLGLSLESNQKHFRGLLTKTRSSSQ
THEETVKYIKEKIGENLSPERSINLFHCLNELNDHSLVEEIQSYLSSGSLSKPKLSPAQW
SALVFVLLTSEKELDVFDLKKYSRSEEGLLRLLQVVKASRAALLSGCGVTEEGCAALVSA
LESNPSHLRELDLSNNDLKDSGVKLLSAGLGNPHCKLETLRLSGCLVTEEGCASLVSALE
SNPSHLRELDLSNNDLKDSGVLTLDLNTVNRHLSLSEENRKVTCRREEQPYPDHPERFED
CGQVLCREGLTGRCYWEVEWSGEGAVIGVTYKGISRRREVNDCCLGYNDKSWSLDCSDNS
YSACHNNNHTTIDVHSSSSHRVGAYMDWPAGTLSFYRASSDTLNHLITFTSTFTEPLYPG
FRLLWVDSSVSLCQTH
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcatctctctgggggccatgacaccaaagctaagagtccaatcaagcaggagagacca
gcctcccctgtacccagctgtgtgtccatgaagagtgacgagtctatggaccatcctata
ctgtttagagagggagacttttctactgaacaaagtccaatcaagcaggagagaccagcc
tcccctgtacccagctgtgtgtccatgaagagtgacgagtctatggaccatcctatactg
tttagagagggagacttttctactgaacaaagtccaatcaagcaggagagaccagcctcc
cctgtacccagctgtgtgtccatgaagagtgacgagtctatggaccatcctatactgttt
agagagggagacttttctactgaacaaagcccaatcaagcaggagagaccagcctcccct
gtacccagttgtcattttgtctctggcttaactcatttacttaatttattccagatgctt
gaagagaaaattatgacatttgtgaagaacgagctgaagatgttcaagaggattcttagt
ccagaactcccagaaggctttgagagtcagaagcaggataaggaagtggtggatgctgaa
gatgagaagcaggagagcagtgccagagagggggctctgaagatcacactgcacgtcctg
aggaaaataaaccagaaggagcttgctgacacactggagaaatatgagcttgctgtgatt
tgccaacgtgaactcaaatctaatctaaagaagaagtttcaatgtgtatttgagggtatc
gctaaacaaggaaacccaacacttctcaataagatctacacagagctctacatcacagag
ggtggaacaggagaggtcaataaggaacatgagctgagacagattgagacaacaaccagg
aaacaagcaagaccagagactgcaatcaaatgtaacgacatcttcaaactcttaactgga
caagacaaacgtatcagatctgtgctgacaaagggagtcgctggcattggaaaaacagtc
tctgtgcagaagttcattctggactgggctgaaggaaaagcaaatcaggatgtccaattt
gtattttcattcccttttcgggagctgaatttgatgaaaggggacaaatacactttcatt
gaacttctcaatcacttctccatggaaaccaaacaatcaggattctccatctacaacaag
tacaaagttctgttcatctttgatggtctggatgagtgccgactgcccctagacttccag
aagaacaagatctgttgggacgtcacagagtcaacctcagtggatgttctgctgacaaac
ctcatcaagggaaatctgcttccctctgctctcctctggataactacccgacctgcagca
gccaataagatcccttcagtgtgtgttgaccaggtgacagaggtacgagggttcaatgac
ccacagaaggaggagtactttaggaagagattcagtgatgaagacctggccagcagaatc
atctcacacataaagacatcaaggagcctccacctcatgtgccacattccagtcttctgt
tggatttctgcaacagtccttgaacacatgctgaaacataagagagaagagatgcccaag
actctgactgagatgtacacacaccttgtggtgtttcataccaaacagaagaatgaaaag
tatcttggaaaagaagagacaggtccacactggaataaagagagcattctgtcactggga
aaactggcttttcagcagcttgtgaatggcaatctgattttctatgaagaagacctgaag
gaggctggcattgatgtcaatgaagcctcagtgtactcaggattgtgcacacagctcttt
aaagaggaatgtgggctgtaccaggacaaggtgtactgctttgttcatctgagcattcag
gagtttctggctgctgtatatgtgttcctctcattcatcaacaacaatgagaatctaatg
gacaaactgcaaacaaacaacaagtctgaaattactttctacaagagtgctgtggataaa
gccttacaaagtgagacgggaaacctggaccttttcctccgcttccttctgggcctctca
ctggagtccaatcagaagcacttccgaggtctactgacaaagacaagaagcagctcacag
acccatgaagaaacagtgaagtacatcaaggagaagatcggggagaatctctctccagag
aggagcatcaatctgttccactgtctgaatgaactgaatgaccattctctagtggaggag
atccaaagctacctgagctcaggaagtctctcaaaacccaaactgtcacctgcacagtgg
tcagctctagtctttgtgttgctgacttcagaaaaggagctggatgtgtttgacctgaag
aaatactccagatcagaggaaggtcttctgaggctgctgcaagtggtcaaagcctccaga
gctgctctgctgtcaggctgtggagtcacagaggaaggttgtgctgctctggtctcagct
ctggagtcaaacccctcacacctgagagagctggatctgagtaacaatgacctgaaggat
tcaggagtgaagctgctctctgctggactggggaatccccactgtaaactggagactctg
aggctgtcaggctgtctagtcacagaggaaggctgtgcttctctggtctccgctctggag
tcaaacccctcacacctgagagagctggatctgagtaacaatgacctgaaggattcagga
gtgctcacactggacctaaacacagtaaacagacacctctctctgtctgaggagaacaga
aaggtgacatgtaggagagaggagcagccgtatcctgatcacccagagagatttgaggac
tgtggacaggtgctgtgtagagaaggtctgactggtcgctgttactgggaggtagagtgg
agtggggaaggggctgttataggagtgacatataaaggaatcagcaggagacgagaggtt
aatgactgttgtcttggatacaatgacaagtcctggagtctggactgctctgacaacagt
tactctgcctgtcacaataataatcacactaccatagacgtccactcctccagctcccac
agagtaggagcgtatatggactggccagccggcactctgtccttctatagagcctcgtct
gacacactgaaccacctgatcacattcacctccacattcactgagcccctctatccaggg
tttaggcttttgtgggttgactcctcagtgtctctttgtcagacacactga
DBGET
integrated database retrieval system
