Salvelinus namaycush (lake trout): 120040733
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Entry
120040733 CDS
T07522
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120040733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120040733
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120040733
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120040733
NCBI-ProteinID:
XP_038841711
UniProt:
A0A8U0U7L1
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Position
3:81462085..81562666
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AA seq
374 aa
AA seq
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MSRVPSPPPPADMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NTAEILILADLHSADQLKTQAVDFINYHAAEVMETSGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtcccgagtccccctccccccgcggacatgtccagcggccctgtggctgag
agctggtgttacactcagatcaaagtggtgaagttctcttacatgtggaccatcaacaac
ttcagcttctgtcgcgaggagatgggcgaggtcatcaagagctccaccttctcttcggga
gccaatgacaagcttaaatggtgtttgcgtgtaaaccctaaaggcctggacgaggagagt
aaagactacctgtccctctacctgctcctggtcagctgtcccaagagcgaggtgcgtgcc
aagttcaagttctccatcctcaatgccaagggagaggagactaaggctatggagagccag
agggcataccggtttgtccaggggaaggactggggctttaagaaattcatcaggagagac
ttcctgctggatgaggccaatgggctgctgcctgacgacaagctcactctcttctgtgag
gtgagtgtggtgcaggactctgtgaacatctcaggtcagaacactatgaacatggtgaag
gtgccagactgcaggctggccgatgagctgggagggctgtgggaacactcccgcttcact
gactgctccctgtgtgtggcgggacaggagttccaggcacacaaagccatcctggcagcc
cgatcgccagtgttcagtgccatgtttgagcatgagatggaggagagtaaaaagaaccgt
gtggagatcaacgatgtggagcccgaggtgttcaaggagatgatgtgcttcatctacaca
ggcaaagcccccaacctggacaagatggctgacgacctgctggctgcggctgacaagtat
gccctggagaggctgaaggtgatgtgtgaggatgctctgtgcaccagtctgtctgtggag
aacactgcagagatcctcatcctggcagacctgcacagtgcagaccaactcaaaacacag
gctgtggacttcatcaactaccatgctgctgaggtgatggagacgtctggctggaagtcc
atggtggcatcccacccccacctggtggctgaggcctatcgctccctggcctcggcccag
tgccccttcctgggacccccacgcaaacgcctcaaacagtcctag
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