Salvelinus namaycush (lake trout): 120041027
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Entry
120041027 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120041027
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120041027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_3
ANCHR-like_BBOX
U-box
Fib_alpha
zf-RING_2
zf-RING_6
YscO-like
Y1_Tnp
Spc24
cas_Cpf1_2nd
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
120041027
NCBI-ProteinID:
XP_038841923
UniProt:
A0A8U0U6W7
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAQQGLLLDQDQFCCSVCLDLLKEPVTTACGHNYCRICIEGCWDQDVLKGVYSCPQCRET
FTPRPNLRKNNMLAELVEKLKKIGLQAAPPPALCYAGPGDVACDVCTGTRKQKALMSCLV
CLASYCETHLQPHYESPALKKHKLVKATAQLQDKICSHHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQERQKELKDLQQAVESFKRSAKSAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSDLREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAYTHLSLSKGNRKVKRTGQVQPYPDHP
NRFTNTLQVLCREGLSGRCYWEVECSGMWVVTAVSYKDISRTETDSGFGDNNKSWSLKYC
SGGYCFIHNNVETKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFNQPLYPG
FRLYGTAELVKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggacttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcctgtggacacaattactgtagaatctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagctggtggagaaactg
aagaagataggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatgtctgcactgggaccaggaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggataagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagacagaaggagctg
aaggacctccaacaggctgtggagtctttcaagcgctctgcaaagtcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagaaaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtattttggagatgtgagtaagact
gtgtctgacctgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcatgtcagctcacactggacccaaacacagcatacacacacctctctctg
tctaaagggaacagaaaggtgaaacgtacaggccaagtccaaccatatcctgaccatcca
aacagattcaccaacacgttgcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtgtagtgggatgtgggttgttacagcagtctcatataaagacatcagc
agaacagagacagatagtggatttggagacaataacaagtcctggagtttaaagtactgt
agtggtggttattgtttcatacacaataatgttgagactaaagtatcaggccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gacacaatgaccctcctccacagagtccagaccacattcaatcagcctctatatcctggg
tttaggctctatggtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
