Salvelinus namaycush (lake trout): 120041038
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Entry
120041038 CDS
T07522
Name
(RefSeq) integrin beta-8-like
KO
K06591
integrin beta 8
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04514
Cell adhesion molecules
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120041038
04514 Cell adhesion molecules
120041038
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120041038
09142 Cell motility
04820 Cytoskeleton in muscle cells
120041038
04810 Regulation of actin cytoskeleton
120041038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120041038
04515 Cell adhesion molecules [BR:
snh04515
]
120041038
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120041038
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin beta subunits
120041038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
PSI_integrin
EGF_Teneurin
EGF_2
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
120041038
NCBI-ProteinID:
XP_038841928
UniProt:
A0A8U0QF85
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MTSWLRKYGNPVLLFLLLAANITSGSSRSGESVCSSPPVSSCSECLRRGPRCAWCFQEGF
LDGAEVGERCDLAVTLTRRGCGLEFIENPEVMVEVNPTTSRTQVSPGEITLTLRPGAEAS
VVVAVQQLERYPVDLYYLVDVSASMQDNLDLLKKVGVALSNRMREHSSDLRLGFGSFVDK
NVSPYINVHPSKINNPCSDYEVKCLPAHGFHHVLSMTSNMSEFTRIIKRQRIAGNMDTPE
GGLDAMLQATVCQGEVGWRGEAKRLLLLMTDQPSHLALDSRLAGIVTPHDGLCHLENSVY
MKSSTMDHPSLGLLAEKLLENHIYSLFAVEQLQYQWYEELVRLLPGSNLLFQAPNLIDRV
VDAYKRLLSVVQVSVSVEDRAFSRFLVSVSPLCPEGSESHDRSCSNVQANQTVYFNITIG
LLSCPDDDDEDDVVQVFVRPVGYNESAVINVRSRCRCHRCHDDIAHQSSCGEDTPDTDHN
NQEVNTHTHLSHTHTSHTHTPELDLEHTHSQERSWQCGAAASGLDCSGRGVCVCERCVCE
RNNLGTVYGTYCQMDDYSCPYQHEILCGGRGVCVSGECVCEEGWTGESCGCPVSTATCLL
NNGLLCSGRGRCVCGRCVCDDHQHSGEFCERCPTCHSSCQSHWRCIDCHLSHGLSQRKMG
HCNHTCTPLVGYVNDVTGDVWRQCVHMKDNCRYRFYTELVSGNTQLHINTQPECVSRGRY
VGMFVSVCVLTFLSGLVMIAVLVLLLQRRSLPQGGATDTQYNPTGKDQSYIPTTNEKTTS
YWRNCPLDQPMELYITIPKMPMGEPWQ
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctggctacgtaaatacggcaatcctgtgctgctcttcctgcttttggccgct
aacatcaccagcgggagctctcgttccggtgagagtgtgtgttcgtctcctcctgtctca
tcatgttcagagtgcctccgacgcggaccacggtgtgcctggtgctttcaggagggtttc
ctggatggagctgaggtgggagagcgctgtgacctggcagtgaccctgaccaggagaggg
tgtggcctagaattcatagagaatccagaggtcatggtggaggtcaaccctacgaccagc
agaacccaggtttcacctggagagatcacactcacactccgaccaggtgctgaggccagt
gtggtagtagcagtccagcagttagagaggtatcctgttgatctgtactacctggtggac
gtatcagcatccatgcaggacaacctggacctgctgaagaaggtgggcgtggccttgtcc
aaccgtatgagagaacattccagtgatctgcgtctgggtttcggctcctttgtcgacaaa
aacgtctctccctacatcaacgtacacccctccaagataaacaacccctgcagtgactac
gaggtgaagtgtcttccagctcatggcttccaccatgttcttagtatgacgtccaacatg
tccgagtttacacgcatcatcaagagacagaggatagcaggcaacatggacacacctgag
ggagggctggatgctatgctgcaagctactgtatgccagggagaggtgggttggcgtggg
gaggccaagcgtctgttgttgttgatgacagaccagccttctcacctggcgttggacagc
agactggctggtatagtcacaccccatgacggactctgtcatctggagaacagtgtttat
atgaagagttctaccatggaccatcccagtttaggcctgctggccgagaagcttctagag
aaccacatctattctctctttgccgtggaacaactacaatatcagtggtatgaggagttg
gtcaggttgctaccgggctccaatcttctgttccaggctcccaacctcatagaccgggta
gtggatgcatacaagaggttgttgtcagttgtccaggtatctgtgtcagtggaggacaga
gcgttcagtcgttttctggtcagtgtctctcctctttgtccggaaggatctgaatcccac
gaccgcagctgttccaatgtccaggccaaccagacggtctacttcaacatcaccatcggc
ctgctgtcctgtcctgacgatgatgacgaagatgacgtggtccaggtcttcgtcaggccc
gtgggttacaacgagtcagccgtcatcaacgttcgatcgcgatgtcgctgtcaccgttgc
cacgacgacatcgcccaccagtcgtcttgtggcgaggacaccccagacacagatcataat
aatcaagaagtcaacacacacacacacctctcacacacacacacctctcacacacacaca
ccggagttggacctggagcacacacactcccaggagcggtcgtggcagtgtggtgcggcg
gcatcggggctggactgtagcggtcggggagtgtgtgtgtgtgagaggtgtgtgtgtgag
aggaacaatctggggacggtgtatggaacgtactgtcagatggatgactactcctgcccc
taccaacacgaaatactgtgtggaggacgaggtgtgtgtgtgtccggtgagtgtgtgtgt
gaggagggctggacaggggagagctgcgggtgcccggtctccacggcaacctgcctgctc
aataacgggttgctatgcagtgggcgtggcaggtgtgtgtgtggcaggtgtgtgtgtgat
gaccatcaacattctggagagttctgtgagagatgccccacctgccacagctcctgtcag
tcacactggaggtgtatagactgtcatttgtctcacggtctgtctcagagaaagatgggg
cattgcaaccatacctgcaccccattggtgggttacgtcaatgatgtcacaggtgatgta
tggagacagtgtgttcatatgaaagacaactgccgctatcgcttctacactgaactggtc
tcaggaaatactcagctacacatcaacacacagcctgagtgtgtatccagagggcggtac
gtggggatgtttgtcagtgtgtgtgtgttgacattcctctctggcctggtgatgatagct
gtactggtgttgctgttgcagagacgatccctgccacagggtggcgccaccgacacacaa
tacaaccccactggcaaggaccagtcatacatcccaaccaccaatgagaagaccacatcc
tactggaggaactgccccctggaccagccaatggagctgtatatcaccattcccaagatg
cctatgggtgaaccctggcagtga
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