Salvelinus namaycush (lake trout): 120041301
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Entry
120041301 CDS
T07522
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120041301
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120041301
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
120041301
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
120041301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
FN3_Tor_3rd
Pur_ac_phosph_N
GH3_M
SdrD_B
Tc-R-P
PTPlike_phytase
DSPc
PTP-SAK
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
120041301
NCBI-ProteinID:
XP_038842168
UniProt:
A0A8U0QFQ5
LinkDB
All DBs
Position
Unknown
AA seq
1742 aa
AA seq
DB search
MLKCNIFCLTLCVASGILLCVAAAEDQKCSINVTEANTSMESITLRLTTAGQECNFTVLS
VDSSFVVTHCVKELEENSTFQCQVVSLEPGTSYILEISSTTDQQRANVTLQTSPSTVRGL
QVSETSDSLGVSWQPGPGRTERFRLLLTDRVGVVKNLTLESTAKDYTVTDLVPGRVYNIT
MVTEAGGRQSTTSRQIQTVPYAVSNLKLENNNTQDSLRASWSQPQGDVDSIVVTLSSSGT
SPLEKTLSSDTTKALFHQLTPGRTYQVSVATKSGELSNQSTASANTVPGKVSQLSMVALD
DSNSLKVMWAPPGGDWDKYRVLLLNGTQTLDNRTVEKGVVEYTFSGLGLVPGRTYRAGVM
VESTREQGTVEYCHRGIAPKPVSELHIRHADETSLSALWSHAPNSARDGYAVELRHGNAT
VATRGLTRDMRECTFNVLMPGRVFTITVTTKSGELNSSVSVLGRTVPMEVRRVHLSNQGH
VDSLQASWELPPGDLDYCSLELLHNNRAVQNHTVPANTTSLQLRDLRPGASYRLVVSTVS
GGMVSKQAVAEGRTVPAAVREVTISNNGRPDFLGVSWQPAFGDVDSYLVLLKDRDRTVHN
LVVSKASPECVFNSLKPGRLYTVSIATRSGSFQNNTVVTARTQPSSVQNPNAIHSARDDF
LKVYWRHASGDLDRYEVVIKYNNTVVQNQTLARSQNDCVFSSLVPGRLYTVTVSTWSGEY
QSTVSTDGRTFPSAVRSLALGDSGTGDLVVTWSPALGDVDHYEVQILFNDTRVYPPVTLG
NEARDHRLASLTPGRLYKIVVSTFSGPNQRPQFIEGRTVPSQVRNLHARPGDQAASLRVF
WTPGDGDVDMYTVSLSQGGHLLETRPVPKHVTELDFQGLVPGQLYGVEVQSLSGILVNHS
TTTGRTVPSTVTALQADSDHTTHSLTVTWETPVGVYEGYKIQLLDDGRDLVSNISMPQGS
TRHLFDQLTPGKWYRVRVVSVSGGIYGKEAVAEGQTRPAAVNGLTVMTANTSGLSFIWRP
SEGYVDGYDLFLYNVDETLRGRQTVEAGTKTCTFSGLVPGTLYKMEVVSRSRGMSSDSSI
LARTVPAPVRSLHVQGGKRTDRLSISWLPGAGEWSGYQVVLYGGLEGSTTTLAAQELGME
QREHLFQGLVPGRVYRAEVVTHSGELTNTASAKGRTAPEPPSMVSFRDISANSSVELTWD
GPASGDYDTFDLQWAPRDSLSITAPQPTSRILDGMFPGRLYNFTIRTVSGGGAKGGPIAN
SQPIQRSLRTNPSRLRNMHCFPQSSSSISCSWTFPDSHWDSYTVEVRQQDSWELVYALRL
ARDSTLLSLENLQPYRRYNVAVRVASAGLSSPAVEENVVTMIDQPLSGVIEGISAGMFLI
GMLIAVISLLVYRQRVRKVAVQESPVVRMSMWKQGPTSGMYVGVRSPVKAAHFESHLTKL
QADSNYLLSEEFEDLKDVGRNQPLDAARLPENRGKNRYNNILPYDSTRVKLSYLEDDPCS
DFINASYIPGNNFRREYIATQGPLPGTKDDFWRMVWEHNVYNVVMVTQCVEKGRVKCDHY
WPADREPLYYGDLVVQMLSESVLAEWTIREFKISSEGRPSFPRVVRHFHYTVWPDHGVPE
TTQSLIEFVRTVRDYIDRAPSTGATVVHCSAGVGRTGTFMVLDRVLQQLDSIGTVDVYGC
VFDLRLHRSHMVQTEYQYSFLHQCVRDVLRARKLRSEQENPLYPIYENFNPDYYRDFVYT
GR
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatgtaacattttttgtttaacactttgtgtggcatcagggattctcttgtgt
gtagccgccgccgaggaccagaaatgtagcataaacgtaaccgaggccaacaccagtatg
gaatctataacattaagactgactacggcgggacaggagtgtaacttcactgtgttatct
gtggacagcagctttgtagtaacacactgtgtgaaggagctggaggaaaacagtacattt
caatgccaggtagtgagtttagaacccggaacatcgtacatcctggaaatctcgtcgacg
acagatcaacaacgggccaatgtcaccctgcagaccagtccatccacagtcagaggccta
caggtatcagagacctcagacagcctgggagtttcctggcagcctggcccagggaggact
gagcgcttcaggctactgctgaccgaccgagtgggtgtggtgaaaaacctgactctggag
agcaccgctaaagactacactgtcaccgacctggtcccagggcgcgtgtataacatcacc
atggtgacggaggcagggggacgccagagtaccacctcaagacaaatacagacagtgccc
tatgccgtctccaacctgaagctagagaacaataacacccaagacagtttgagggcatca
tggagtcaaccccagggtgatgtggactctatagtggtgaccctgtcctcgtctggaacc
agccctctggagaagaccctgtcatctgacaccacaaaggccctctttcaccagctgaca
cccggacggacctatcaggtgtctgtcgccaccaagagcggagagctctccaaccaatca
actgcctcggctaacacagtcccaggtaaagtgtcccagctctctatggtggcgctggat
gactccaactctctgaaggtgatgtgggctccccctggtggagactgggataagtacagg
gtgctgctgttaaatgggacccagactctggataacaggaccgtggagaaaggggtggtg
gagtacaccttctctggcctgggactggtccctgggaggacctacagggctggggtcatg
gtggaaagcaccagggagcaaggcactgtggagtactgccacagaggaatagctcctaag
cccgtctcagagctccatatccgccacgctgacgagacctccctcagcgccctgtggagt
cacgcccccaactcagccagggatggctacgccgtggagctccgccatggcaacgccacg
gttgccacgagaggcctgacccgtgacatgagggagtgcaccttcaacgtgctcatgccc
ggacgcgtgttcaccatcaccgtgacaaccaagagcggggagctcaacagctctgtgtcg
gtgttagggaggacagtacctatggaggtgaggcgtgtccacctgagcaaccagggccac
gtggacagcttacaggccagctgggaactcccccctggagacctggactactgcagcctg
gagctcctccacaacaaccgggcagtgcagaaccacaccgtcccggccaacaccacctct
ctgcagctcagagacctcaggcctggtgcctcctacaggctggtggtcagtactgtcagt
ggtgggatggtgtcgaagcaggccgtggctgagggacgcactgtaccagctgcggtcaga
gaagttacgatcagtaacaacggtcgtccagacttcctgggggtgtcgtggcagccagcg
ttcggagatgtggacagttacctggtcctactgaaggaccgcgacaggaccgtacacaac
ctggtggtttctaaggcaagcccagagtgtgtgtttaactccctcaagccagggaggctg
tacaccgtctccatagcaacccgcagcggcagcttccagaacaacacggtggtgacggct
cgtacacaaccctccagtgtccagaaccccaacgccatccactctgccagggacgacttc
ctgaaagtctactggcgtcatgcgtccggagacttggaccgttacgaggtggtcattaag
tacaacaacacggtggtccagaaccagacgctggcgcggtcgcagaacgactgtgtgttc
agctccctggtccctgggaggctttatacggtcactgtcagcacctggagcggagagtac
cagtccactgtttctactgacgggagaacattcccctctgcggtgcggagcctggccctg
ggtgacagtggtacaggtgatctggtggtcacatggtctccagcgctgggggacgttgat
cactacgaggtccagattctcttcaacgacacgcgggtttacccgcccgtaaccctgggc
aacgaggcccgtgaccaccgcctggcctcgctcaccccgggacgcctgtacaagatcgtg
gtgtccaccttcagcggacccaaccagagaccgcagttcatcgagggcaggacagtcccc
agccaggtgaggaacctccatgcccggccaggggaccaggctgccagcctgagggtgttc
tggacccctggtgatggggacgtggacatgtacaccgtgtccctatcccagggaggacac
cttctggagaccagacctgtccccaaacacgtcactgagctggactttcagggtctggta
ccaggacagctgtacggggtcgaggttcagtccctgagtggaatactggtcaatcattca
actactactggacgaacagtcccctccacagtgacagcgctccaggcagacagtgaccac
accacccacagtctaacagtgacctgggagactccagtgggagtgtacgagggttataag
atccagctcctggatgatggacgtgacctagtctctaatatttccatgccccagggctcc
accaggcacctcttcgaccagctgacccctgggaagtggtaccgggttcgggtcgtatcc
gtcagtggagggatctatggcaaggaggccgtggctgagggacaaacacgtccagctgca
gtcaacggtctgaccgtgatgactgccaacaccagcggtctgagtttcatctggcgcccg
tccgagggctacgtggacggttacgacctgttcctgtataacgttgacgagacgttgcgt
ggccgtcagaccgtggaggccgggaccaagacgtgcaccttctctggtctggtcccaggg
acgctgtacaagatggaggtggtgagcaggagcagaggaatgagcagtgactcatctata
ctagcacggacagtcccagccccagtgcgctctctccacgtccagggtggtaagcgtact
gatcgtctctccatcagctggctgcctggggcaggggagtggagtgggtaccaagtggtc
ctgtacggtggcctggagggctcaaccactaccctggcagcccaggagctgggcatggag
cagagagaacacctgttccagggactggtacctggccgtgtgtaccgggctgaggtggtc
acacacagtggagagctgactaatactgcgtctgcaaagggaagaacggccccagagcct
ccctccatggtatccttcagagacatcagtgctaacagctctgtagaactgacctgggat
ggtcccgcctctggtgactacgacacctttgacctccaatgggctcccagagattccctg
tcaatcacagcgcctcagccaaccagccgcatcctggatgggatgttcccgggacgactg
tacaacttcaccatccgcactgtcagtgggggaggagccaagggagggcctatcgccaac
agccagccaatccagaggagcctcagaacaaacccatccagactgcggaacatgcattgt
ttcccccagagttcctcatccatctcctgttcctggaccttccctgactcacactgggac
tcctataccgtggaggtgcgtcagcaggacagctgggagctggtgtacgccctgcgtctg
gcccgggatagtaccttactgagcctggagaacctacagccttacaggagatacaacgtg
gctgtcagagtggcctccgctggactcagcagccccgccgtggaggagaacgtggtcacc
atgatcgaccagcccctcagcggagtcatcgagggcatcagcgctggaatgttcctcatc
ggaatgttgatcgccgtcatctccctcctcgtctacaggcagagagtccgtaaagtggca
gtacaggagagcccagtggtacggatgagcatgtggaagcaggggcctacatcagggatg
tacgttggagtcagaagccccgtcaaagcagcccactttgaatcccacctcactaagcta
caggcagactccaactaccttctgtcagaagagtttgaggatctgaaggatgtgggtcgt
aaccagcctctggatgcagcccgtctaccagagaacaggggcaagaaccgttacaacaac
atactgccctatgattccaccagagtgaagctctcctacctggaggatgacccctgttct
gactttatcaatgccagttatataccagggaacaacttccgtcgtgagtacatcgccacc
caaggccctctccccggaaccaaggacgacttctggaggatggtgtgggagcacaacgta
tacaacgtcgtcatggtgacgcagtgtgtcgagaagggacgggtgaagtgtgaccactac
tggccggctgaccgggagcctctgtactatggagacctggtggttcaaatgctgtctgag
tctgtcctggctgaatggacaatcagggagttcaagatcagctctgagggtcgtcccagc
ttccctcgggtggtgagacacttccactacacggtgtggccagaccacggggtccctgag
accacccagtccctcatcgagttcgtacggaccgtcagggactacatcgacagagccccc
agcactggagccaccgttgttcactgcagtgctggagtgggtcgtacagggacgttcatg
gttctggaccgggtccttcaacagctggacagcataggaacagtggatgtctacggctgt
gtgtttgacctccgcctgcaccgctctcacatggtgcaaacagagtaccagtactccttc
ctccaccagtgtgttcgagatgtcctgagagccaggaagctccgtagtgagcaggagaac
cctctctaccccatctatgagaacttcaacccagactactaccgtgattttgtgtacacg
ggacgctaa
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