Salvelinus namaycush (lake trout): 120041330
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Entry
120041330 CDS
T07522
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120041330
Enzymes [BR:
snh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120041330
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120041330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120041330
NCBI-ProteinID:
XP_038842195
UniProt:
A0A8U0U7E8
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MSEQDNHLMEKELCSDSGTADCVEEAFVFGEDLELNRFDGLPFSSRYYKLLQERKSLPVW
KAREEFLDILVNNRLVIVSGTTQTGKSTQIPQWCAEFCLSAQYQHGVAVSTQIHSQQAVD
LALRVADEMDVNIGHEVGYTIPLETCCSTDTVLRFCTDALLLREMMSDPMLERYGAIVID
QAHERTVSTDILLGLLQDILVHRPDLRVVILTVSSMTDRLLAHYGSNVPVVRLEALCPAE
VVYSNCSSKDYFYSALRLVLEIHRTKEKGDVLLFLASAQEVVCARAILQREGTRLGADLG
ELVPVVLCPGQGRAPSLLGEGMGSRGTVTTRSRRVFLSTSQGEDMFWAVDSVNFVIDAGV
EKRYVYNPRIRANSEVLRPISRCQADIRKQLTGPTGKCFCLYPEERVLPVETSPQILDTN
LTSTILFLKRMEIAGLRHCDFITRPDPEGLMQSLEELDYLAALDDDGNLSEIGIIISELP
LDAQMAKALLASCEFDCVNEVVTIAAMLSAPSCFLEPPVGRTQEVHQCHRKFRHPEGDHF
TLINIYNAFKYSQRETYFSVEKWCQDYHLNHRALHTADAIRSELTDILKRIELPVSETSF
GTKTNTLNIKRALLSGFFMQIARDVDGSGNYFMLTNRHMAQVHPASSYGAKAHQLGLPEW
VLFHEYTLSENNCIRTVSEISPAVFIQTAPQYFYYNLPPSESKDLLQHILDRDGSGRKDK
QQTLTINSKADKDCSTVAQSYDRCVLQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcaggacaatcatttgatggagaaagagctttgttcagattcgggaactgct
gactgtgtggaagaagcttttgtcttcggagaggatctggagctgaaccgatttgatgga
ttgcccttctcctctcgttattataaactactgcaagagagaaagtctctacctgtttgg
aaagctagagaggaatttttggatatcctggtgaacaatcgacttgtcatagtatctggt
acaactcaaactgggaaaagtacacagatcccccagtggtgtgcagagttctgcctgtcg
gcccagtaccagcacggcgtggcagtgtctacccagatccactcccagcaggcggtagac
ctggccctcagggtggccgatgagatggacgtcaacattggacatgaagtgggctacacc
atccctctggagacgtgctgttctactgacactgtgctcaggttctgtacagatgccctg
ctactgagggagatgatgtctgaccccatgttggagcgctacggggccatcgtcatcgac
caggctcatgagagaaccgtcagcacagacatactgctgggactgctccaggacatcctg
gtccatagaccagacctgagggtggtgatcctgactgtgtcctccatgacagacaggctc
ctggcccactacggtagtaacgtccctgtggtccgtctggaagccctctgtccagctgag
gtggtctacagtaactgtagtagtaaagactacttctactctgctctgagattggtactg
gagattcaccgtaccaaggagaagggagatgtgctgctgttcttggcctcagctcaggaa
gttgtctgtgcccgtgctatcctccagagagagggtaccagactgggggcagacctgggg
gagctggtgcccgtggtcttgtgccctgggcagggtcgtgcaccctctctcctgggggag
gggatggggagtaggggaacagttacgaccaggagccggagggttttcctctccacaagc
cagggagaggacatgttctgggctgtggactctgttaactttgtcatcgacgcaggagtc
gagaaaagatatgtgtataatcccaggataagggccaactctgaggtactacgacccatc
agcagatgccaggcagacatcaggaagcagctgactggaccgacagggaagtgtttctgc
ctttaccctgaggagagagttctccccgtagagacatcccctcagatcctggacaccaac
ctcacctctaccatcctcttcctcaagaggatggagatcgcagggctgagacactgtgac
ttcatcaccagaccagatccagagggtctgatgcagtcgctagaggagctggattacctc
gcggcattggacgacgatgggaacctatcagagatcgggatcataatctctgagttgcca
ttggacgctcagatggccaaggctctgctggcgtcctgtgagtttgattgtgtgaacgag
gtggtgaccatcgcagctatgctatcagcgccaagctgcttcctggagccacctgttggc
aggacccaagaggtacaccagtgccacagaaagttccggcaccctgagggagaccacttc
accctcatcaacatctacaacgccttcaaatacagccagagagagacatacttcagcgta
gagaagtggtgtcaggactaccatctaaaccaccgcgcccttcacacagcagacgccatc
aggtccgagttgactgacatcctgaagagaatagagctgcccgtctctgagacgtccttc
ggaaccaagaccaacacactgaacatcaagagagctctgctgtcagggttctttatgcag
attgcccgtgatgtggacggctcaggaaactacttcatgttgaccaacaggcacatggct
caggtccaccctgcctccagctatggggccaaggcccatcaactgggtttgccagagtgg
gtgctgttccatgagtatacgctctcggaaaacaactgtatccggacagtctctgaaatc
tcccctgcagtgttcatccagacggcccctcagtatttctattacaacctgcctcctagt
gagagtaaagacctactacagcacatcctggaccgggacggatctggacggaaagacaag
caacagaccctgacaatcaacagtaaagcggataaggactgcagtacagtggctcagtct
tatgacagatgtgtgctacagtga
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