Salvelinus namaycush (lake trout): 120041336
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Entry
120041336 CDS
T07522
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120041336
Enzymes [BR:
snh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120041336
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120041336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120041336
NCBI-ProteinID:
XP_038842202
UniProt:
A0A8U0QF65
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MSEQDNHLMEKEICSDSGTADCVEEAFVFGEDLELNRFDGLPFSSRYYKLLQERKSLPVW
KAREEFLDILVNNRLVIVSGTTQTGKSTQIPQWCAEFCLSAQYQHGVAVSTQIHSQQAVD
LALRVADEMDVNIGHEVGYTIPLETCCSTDTVLRFCTDALLLREMMSDPMLERYGAIVID
QAHERTVSTDILLGLLQDILVHRPDLRVVILTVCSMTDRLLAHYGSNVPVVRLEALCPAE
VVYSNCSSKDYFYSALRLVLEIHRTKEKGDVLLFLASAQEVVCARAILQREGTRLGADLG
ELVPVVWCPGQGRAPSLLGEGMGSRGTVTTRSRRVFLSTSQGEDMFWAVDSVNFVIDAGV
EKRYVYNPRIRANSEVLRPISRYQADVRKQLTGPTGKCFCLYPEERVLPVETSPQILDTN
LTSTILFLKRMEIAGLGHCDFITRPDPEGLMQSLEELDYLAALDDDGNLSEIGIIISELP
LDAQMAKALLASCEFDCVNEVVTIAAMLSAPSCFLEPPVGRTQEVHQCHRKFRHPEGDHF
TLINIYNAFKYSQRETYFSVEKWCQDYHLNHRALHTADAIRSDLTDILKRIELPVSETSF
GTKTNTLNIKRALLSGFFMQIARDVDGSGNYFMLTNRHMAQVHPASSYGAKAHQLGLPEW
VLFHEYTLSENNCIRTVSEISPAVFIKTAPQYFYYNLPPSESKDLLQHILDGSGRKDKQQ
TLTINSKADKDCSTVAQSYDRCVLQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcaggacaatcatttgatggagaaagagatttgttcagattcgggaactgct
gactgtgtggaagaagcttttgtcttcggagaggatctggagctgaaccgatttgacgga
ttgcccttctcctctcgttattataaactactgcaagagagaaagtctctacctgtttgg
aaagctagagaggaatttttggatatcctggtgaacaatcgacttgtcatagtatctggt
acaactcaaactgggaaaagtacacagatcccccagtggtgtgcagagttctgcctgtcg
gcccagtaccagcatggcgtggcagtgtcgacccagatccactcccagcaggcggtagac
ctggccctcagggtggccgatgagatggacgtcaacattggacatgaagtgggctacacc
atccctctggagacgtgctgttctactgacactgtgctcaggttctgtacagatgccctg
ctactgagggagatgatgtctgaccccatgttggagcgctacggggccatcgtcatcgac
caggctcatgagagaaccgtcagcacagacatactgctgggactgctccaggacatcctg
gtccatagaccagacctgagggtggtgatcctgactgtgtgctccatgacagacaggctc
ctggcccactacggtagcaacgtccctgtggtccgtctggaagccctctgtccagctgag
gtggtctacagtaactgtagtagtaaagactacttctactctgctctgagattggtactg
gagattcaccgtaccaaggagaagggagatgtgctgctgttcttggcctcagcccaggag
gttgtctgtgcccgtgctatcctccagagagagggtaccagactgggggcagacctgggg
gagctggtgcccgtggtctggtgccctgggcagggtcgggcaccctctctcctgggggag
gggatggggagtaggggaacagttacgaccaggagccggagggttttcctctccacaagc
cagggagaggacatgttctgggctgtggactctgttaactttgtcatcgacgcaggagtc
gagaaaagatatgtgtataatcccaggataagggccaactctgaggtactacgacccatc
agcagataccaggcagacgtcaggaagcagctgactggaccgacagggaagtgtttctgc
ctttaccctgaggagagagttctccccgtagagacatcccctcagatcctggacaccaac
ctcacctctaccatcctcttcctcaagaggatggagatcgcagggctgggacactgtgac
ttcatcaccagaccagatccagagggtctgatgcagtcgctagaggagctggattacctc
gcggcattggacgacgatgggaacctatcagagatcgggatcataatctctgagttgcca
ttggacgctcagatggccaaggctctgctggcgtcctgtgagtttgattgtgtgaacgag
gtggtgaccatcgcagctatgctatcagcgccaagctgcttcctggagccacctgttggc
aggacccaagaggtacaccagtgccacagaaagttccggcaccctgagggagaccacttc
accctcatcaacatctacaacgccttcaaatacagccagagagagacatacttcagcgta
gagaagtggtgtcaggactaccatctaaaccaccgcgcccttcacacagcagacgccatc
aggtccgatttgactgacatcctgaagagaatagagctgcccgtctctgagacgtccttc
ggaaccaagaccaacacactgaacatcaagagagctctgctgtcagggttcttcatgcag
attgcccgtgatgtggacggttcaggaaactacttcatgttgaccaacaggcacatggct
caggtccaccctgcctccagctatggggccaaggcccatcaactgggtttgccagagtgg
gtgctgttccatgagtatacgctctcggaaaacaactgtatccggacagtctctgaaatc
tcccctgcagtgttcatcaagacggcccctcagtatttctattacaacctgcctcctagt
gagagtaaagacctactacagcacatcctggacggatctggacggaaagacaagcaacag
accctgacaatcaacagtaaagcggataaggactgcagtacagtggctcagtcttatgac
agatgtgtgctacagtga
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