Salvelinus namaycush (lake trout): 120041591
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Entry
120041591 CDS
T07522
Name
(RefSeq) girdin-like
KO
K25392
girdin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120041591
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120041591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
DUF4472
INO80F
Motif
Other DBs
NCBI-GeneID:
120041591
NCBI-ProteinID:
XP_038842387
UniProt:
A0A8U0QFF3
LinkDB
All DBs
Position
Unknown
AA seq
1857 aa
AA seq
DB search
MESEVFLPHLEQFMLSPLVIWVKTFGQNDGNMTLDYSELLDGVVLNKIMIQINPKATLQS
INKVNNDPSQRILNLTVLIRQIKTYYLETLRQLIMMPLPNLLVLGKTPHCEQSLEEMKKL
LLLLLGCAVQCEKKEEYVERIQTLDFDTKAAIAAHIQEVTHSQDSVLDLHWLEASELCAE
DLETLFRRLVDQRDTQLETILELMQERESTSSPSPPSAQSPSDCPSMQQQAASHQHLSVE
LADSKAKVRRLRQELEEKSEQVLDCRQELENMEAEFKRIQQENSVLLAEARSARTYRDEL
DALRERAIRADKLESEVGRYREKLHNMEFYKAKVEELKEDNCVLLETKAVLQQQLEGWRA
RSDKLHQLEKHSLLLNARVHVMEQEKEVDRRRMEELQEENLALELAQRRSMEESQHLGWE
LEQLSRSPDNSQGQKSLGEEVVDGTRSHLLRLERENQSLLRTIEDLRAADLSLGPQHNHN
HEHTRRDSQRPTNTVEVVREYLGSLDNTSWEQSELVIKEDCDIDIDTSHHTKCNGVSVDL
EGEIDRLERESETLKEKMDLQKQEKGQLEDGESCHLSDPMADPEAVAKDNTRNLLQPGAS
VSLTRDTSPCSKNKSPRRENSSTGLQTRASSSSTKHTERLEAKCRALDTENQRLQAALDN
TGRKLQRLEAEVHELEAENQILQAGLEELRISSRRMEQLEQEKQTLEQEASGLERDKRRL
EKENRRLRQQAEIQDSTLDGSNLRVASLERENRGMGKEVERLKEVEERVKGLERDNRELA
KQGAISQRALVTLREELVSDKLKTQQRENELERLAQELEMRVLNQDTSPQSDEETPDNRF
KMLESELESSLKRSLQIKEDKMAAVEARLQESSTLNQQLRQELKTVRLNYEALLQREEEE
HAARSPTPQRESDRAVSGWQRESQEATRELLRVKDRLIEVERNNATLQAERQALQAQLRQ
LETQSDGLQAQILALQRQTASLQENNTALQTHNANLQVEKSTLNSQSASLLAQNAQLQCQ
QSSTEGDKEVAMREREELRAVYDQLLRDHERLAALHERQAMDYEALMGKHGCLKNVHRTL
ELEHRTLEDRYKTLLQQKAKLEGLEKALREEQDKMSVEKEQHRTTASECRQLRDEKDWLN
QTYRQLLKDQEELQADHKNMKTLLNSTKLEQTKLESNFNKLREQYQQLDITNTKLTNQCE
LLSQLKGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQHIDKLNELRRQKE
KLEEKIMDQYKFYDPSPPRRRGNWIALKMRKLMKPRSRERCGPASSSDHHRSLTPTRSGS
FEALPPTSPSAPCCQDNDSFVGSDGSGGSTTSPRRSSTLNDLDKLNDLVYPSTLSEDPEQ
LEGSEVKNDRSRKESMTSSMSDSILSIINHQHQLTTTPLFYPTATAAAAATDSNEPCLTD
KDYNDSAVATDFDDGDELQNHGLNGVPSRAQSQSSGEFSLDNEPWSNGSSPVQPPPSSRR
SSSSCLPPSDTSTPRHTRQNPSPTTHTQQRSTSLTHTSSNKHRERVGVKNSSPIAIANTQ
GSVPCRGREVGSTQDPWPRRSVLRRCASGSRAPQQPSEGNVPKTAQGQVAVLSRSGLGLN
KAPETTTTRASAMSPIAVLYVQGKSSSVSGCLNCFSTPLGKEARLRGPWSPTSLPRASSV
ISTAEGSSRRSSVNSDSRVMAKVGPLPIMESDGSPNQETDTVNQNQNKQNNPEERDTNNQ
PPPPSKPPRDPVVATDRPKSTCQESLFGGTPFNLDSVFSDTIFSESVVTTTTSNNGNNND
KNQTFLCLNPELVRNVSCSPLSQESTNGTAPGRMDNVRSQNGGQEDCESNTVEMTQC
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggtttttcttccccatctggagcaatttatgctcagcccgcttgtcatt
tgggtgaagacatttgggcaaaacgatgggaacatgacattggattattccgagttactg
gatggggtagttttgaacaagatcatgattcaaataaaccccaaagcgactcttcagagc
atcaacaaagtgaacaacgaccccagtcagaggattctgaacctgaccgttctcatccgt
caaatcaaaacctattacctagagactctgaggcagctgatcatgatgcccttacccaac
ttgttggtgcttggcaagactcctcactgtgagcaaagtctggaggaaatgaagaaatta
cttcttctcttattgggctgtgctgtccagtgtgagaagaaagaggagtacgtggaacgc
atccagaccctcgacttcgacacgaaagcagcaatagctgctcatatccaagaggttacc
cacagtcaggatagtgtactggacctccattggctggaggccagcgagctctgtgctgag
gacctggagaccctgttcagacgcctggtggaccagagagacacacagctggagactatt
ttagagctaatgcaggagagagagtccacctcgtcaccctctccgcccagcgcccagtcc
cccagcgactgtcccagcatgcaacagcaggcggcatcccaccagcacctgtctgtagag
ctggccgactccaaggccaaggtcagacggctgcgtcaggagctagaggagaagagtgag
caggtactggactgcagacaggagctggagaacatggaggctgagttcaagaggattcaa
caggagaactctgtgttgctagcggaggcccggtcagcccgtacgtaccgtgacgagctg
gatgccctgagagagagggccatcagggctgacaagctggagagcgaggtgggacgatac
cgcgagaaactacacaacatggagttctacaaggccaaagtggaggagttgaaggaggat
aactgtgtgttgctggagaccaaggctgtactgcagcagcagctggaggggtggagggcc
cgctctgataaactacaccagctagagaaacacagtctgctgctcaacgccagggtccat
gtcatggaacaggagaaggaggtggacaggaggcgcatggaggagctgcaggaggagaac
ctggccttggagctggcccagaggaggagcatggaggagtcacagcacctgggatgggag
ctggagcagctctccaggagccccgacaactcacagggtcagaagtctctgggtgaggag
gtggttgatgggactaggagtcatctgctgaggctggagagagagaaccaaagcctgctc
aggaccatagaggatctgagagctgctgacctcagcctgggaccgcagcacaaccataac
catgagcacacgcggagggacagccagcgacccacaaacacggttgaggtggttagagag
taccttggcagtttagacaacacctcctgggagcagtctgaattggtcatcaaagaggat
tgtgacattgacatagacacatcacatcacacaaagtgcaacggagtgtcggttgaccta
gagggagagattgaccgactggagagagagagcgagaccctcaaggagaagatggacctt
cagaagcaagagaaaggccaactcgaagacggagagtcttgccatctgagtgaccccatg
gctgacccggaagcagtagctaaagacaacacccgcaatctccttcaaccaggcgcttca
gtgtctctgactcgcgacacctcaccctgctctaagaacaagagtccacgtcgggagaac
agtagcacggggctgcagacgagggcttcctcttcatccactaagcacacagagcgcctg
gaagctaagtgtagagccctggacacagagaaccagcggcttcaggctgccctggacaac
acaggccggaagctccagcggctggaggccgaggtccacgagctggaggctgagaaccag
atcctgcaggctgggctggaggagctgaggatctcctcgcggcgcatggagcagctggag
caggagaagcagaccctggagcaggaggcttcaggcctggagagagataagaggaggctg
gagaaggagaaccgcaggctgaggcaacaggcagagatccaggactctaccctggacggg
agcaacctgagggtggctagtctggagagagagaacagggggatggggaaggaggtggag
aggctgaaggaggtggaggagagggtcaaggggctggagagggataacagagagctggcc
aagcagggagcgatcagccagagggccctggtcaccctgagagaggagttggtgagtgac
aagctgaagacccagcagagggagaatgagctggagaggctggcccaggagctggagatg
agagtcctcaaccaggacacatcaccacagagtgacgaggaaactccagacaacaggttc
aagatgttggagtctgagctggagtcgtctctgaagaggtccctgcagatcaaagaagac
aagatggctgccgttgaggctcgtctgcaggagtcctccaccctcaaccagcagctacgt
caagagctcaagactgtgcgtctgaactacgaagccctgttgcagagggaggaggaggag
catgcggcccgtagccccacccctcagagggagagtgacagggcggtaagcggatggcag
cgggagagccaggaggccaccagggagctgctgagggtcaaggaccgcctcatcgaggtg
gagaggaacaatgccacactgcaggcagagcgtcaggcactgcaggcccagctcagacag
ctggagacccagtcagacggcctgcaggctcagatcctggccctgcagagacagaccgcc
tccctgcaggagaacaacacggctctccagacacacaacgctaacctgcaggtggagaag
tccactctgaactcccagagtgcatcactcctggcccagaacgctcagctccaatgccaa
caatccagcactgagggtgataaggaggtggccatgcgtgagcgcgaggagctgcgcgcc
gtgtacgaccagctcctgagggaccacgagaggctggcggcgctgcacgagagacaagcc
atggactacgaggccctgatgggaaaacacggctgtctgaagaacgtccaccgcactctg
gagctggagcatagaacgctggaggacaggtacaaaacgctgctgcagcagaaggccaaa
ctagaaggtctggagaaggctctgagagaggagcaggacaagatgtctgtggagaaggag
cagcacaggaccaccgcctcagagtgtcgacagctccgggatgagaaggactggctgaac
cagacgtaccgtcagctgttgaaggatcaggaggagctccaggcggaccataagaacatg
aagaccctgctgaacagcaccaagctggagcagaccaagctagagtccaacttcaacaag
ctcagagagcagtaccaacagctagacatcaccaacaccaagctcaccaaccagtgtgag
ctgctgagtcagttgaaggggaacctggaggaggagaaccgtcacctgctggaccagatc
cagaccctgatgctgcagaaccgcaccctgctagaacagaccatggagagcaaggacctg
ttccacgtagaacagagacagcacatagacaagctgaatgagctgaggagacagaaggag
aagctggaggagaagatcatggatcagtataagttctatgacccctcacccccacggagg
cgtgggaactggatcgccctgaaaatgaggaagctgatgaagccgaggagccgcgagcgt
tgtggccccgcctcctcttctgaccaccatcgctccctcacccccacacgctccgggtcc
ttcgaggccctcccgcccacctccccctctgctccctgttgccaggacaacgactccttc
gtgggttcggacggctcgggtgggtccaccacctccccccggaggagcagcaccctgaat
gacctggacaaactgaatgacttggtgtacccctcaaccctgtctgaggaccctgagcag
ctagaggggtcagaggtcaagaatgacagatccaggaaggagtctatgacctcatccatg
agcgactccatcttgtccatcatcaaccatcaacaccagctcaccaccactcctttgttt
tatcccaccgccactgctgctgccgctgccactgatagcaatgagccatgtttgacagac
aaggattataatgacagtgctgtggcgactgactttgacgacggtgatgaactacaaaac
cacggtctgaatggcgtgccgagccgtgcccagagccagagcagcggagagttcagcctc
gacaacgaaccctggtccaacggcagtagcccggtccagccgcctccgtcatcccgccgc
tcctcttcctcctgccttccgcctagcgatacctccaccccccgacacacacggcagaac
ccctcgccgaccacacacacacagcagcgatccacttccttaacacacaccagcagcaac
aaacacagagagagggtaggagtaaagaactcctcacctattgccatagcaaacacccag
ggttcagttccctgtagggggagggaggttggtagcacccaggacccctggcccagaagg
agtgtcctcaggaggtgcgccagcgggagcagagccccccagcagccttccgaagggaat
gtccccaaaacagctcagggacaggttgctgtactatctcgatctggattaggtctgaac
aaagctccggagaccaccaccacccgagcctcagccatgtccccgatcgcggtgctctac
gtccagggtaaatcttcctctgtgtctgggtgtctcaactgtttctccaccccgttgggg
aaggaggcgcgtctaagagggccatggtctcctacctctctaccccgggccagtagcgtc
atctcaacagccgagggttcctcgcgacgatccagtgtcaacagtgactctagggtgatg
gcgaaagtaggtcccttacctatcatggaatctgatgggagcccgaatcaggagacggac
acggttaatcagaatcagaacaagcagaacaatccagaagaacgagacactaataatcaa
ccaccaccaccaagcaaaccccccagagacccagtggtagccaccgatcgacccaaatcc
acctgccaggaatccctcttcggtggcaccccgttcaacctagactctgtcttctcagac
actatctttagcgagtcggtagtcaccaccactactagtaacaacggcaataataacgat
aagaaccagactttcctctgtctgaacccagaactggtgcgtaacgtcagttgctcgccg
ctgagtcaggagtccactaacggcacggcaccgggacgcatggacaatgtacggagccaa
aatggaggacaagaagactgtgagagtaatactgtggaaatgactcagtgctga
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integrated database retrieval system