Salvelinus namaycush (lake trout): 120041596
Help
Entry
120041596 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120041596
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
90S particles
Other 90S particles
120041596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
Suf
HAT_Syf1_CNRKL1_C
ARM_TT21
TPR_16
TPR_15
TPR_CcmH_CycH
NRDE-2
ARM_TT21_5th
TPR_7
ANAPC3
Wzy_C_2
TPR_12
Motif
Other DBs
NCBI-GeneID:
120041596
NCBI-ProteinID:
XP_038842393
UniProt:
A0A8U0QG48
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
DVEKEKLLLSFKAVAGGDTEGPPKPKFDFEVGKKVEVKVVSKVLTGLEVSILPEETTALL
PMMHLSDHVSNCLLLWEGLQEGDIISNIVCLSKNKQNITLTKKPTVKSFLEEGGVVAKEF
SDITVGVQLIGWVKNIMPYGVFVEFPYGLVGLAPKAAISDKFVSDTAAHFQLGHTVVARV
TNLDEEKHRFLVSLKVSEVTSPERDGQARLIRGLQERKAVMEMMANRGDSDLLQQLSAVT
IGQKMKMSVDEVREDGSVTFKSDELSAATVLATKDHAPGKLATGQKCMPVILHVDLVTSQ
VYVSLLTKLTGKRQEVEAGSTHTATVHHVDACEELRAPPSVLGTRPTERKRLISDSKGSK
GTYRYGDVVKGKVKKVKPTCVLVTLEDGSTGCVHVSEIQEVVCVGTFPTSLLKIGSEVTA
RVIGGREGNSHRFLPFSHRNFTYFHDAKHPEKLFKLGQADPNLGLLVKLPFSAMGTVAME
DLADKYKRKPLERYSKGQCCIVGEANGKWQLSLRSSRTDPEKASVVKDPEIVSLEDLSEG
QIVRGYMRTVNAHGVFHRQENGLVDLSLLQEDTGKPDVLPESLGLHLRLTGEAKEKRDAT
KKRKRTESESKQGTAENVSKKTKKTKKGKKGKGEDSDSGVEVYFREEEEENKLEVEKPVP
VQPARLQVTGGFSWCSAERPETSIRCPGGEDNEVNTKPQKKSHHEQEVEKREAEKALTKL
ETELMDPGLRPQTAASFERLLLGSPNSSLLWLQFMAFHLQATQIEQARAVAERALKTISF
REEQEKLNVWVALLNLENLYGTEESLQKVFERAVQYCEPMPVYQQLADIYAKCQKTKEAE
GLYKTMVKRFRQEKAVWLSYGTFLLQQGQSDAASALLQRAIKSLPNKDNVDLIAKFAQLE
FRYGDVERGKTMLDRILTSYPKRTDLWSVFIDLMVKHGSQKEVRAVFDRVIHLSVAVKRI
KFFFKRYLEYEKKNGTPESIQAVKEKALEYVESKGTEAAR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
gacgtggagaaggagaagctccttctttccttcaaggcagtggcaggaggagacactgag
ggaccgcctaaacccaagtttgactttgaggttgggaagaaagtggaggttaaggtggtg
agtaaagtccttaccggtctggaggtgtccattctgccagaggagaccaccgccttgcta
cccatgatgcacctctccgaccacgtgtccaactgcctactgctgtgggaggggctgcaa
gagggtgacatcatctccaacattgtctgcctcagcaagaacaaacagaatattaccctg
actaaaaagcccactgtgaagtcattcctggaggaggggggtgtggtggctaaggagttc
tctgacatcacagttggggtgcagctgattggctgggtcaagaacatcatgccctacgga
gtgtttgtggagttcccctatggcctggttggcctggcccctaaagcggccataagtgac
aagttcgtcagcgacacggcggctcacttccagctgggccatacggtggttgccagggtg
accaacttggacgaggagaagcacaggttcctggtcagtctcaaggtgtcagaggtcacc
tcccctgagagagacggccaggccaggctgatccgaggcctgcaggagaggaaggccgtg
atggagatgatggccaacagaggtgactctgacctactccagcagctgtctgcggtgacc
ataggccagaagatgaagatgagcgtagacgaggtgagggaggatgggagtgtcaccttc
aagtcagacgaactcagcgcagccaccgtactggccaccaaggaccatgcgccgggtaag
ttggcgacgggacagaagtgcatgccggtaatcctccacgttgacctcgtgacctctcaa
gtctacgtgtccctcttgacgaaactgaccggcaagaggcaagaggtggaggcagggtcc
acacacactgccactgtgcatcacgtcgacgcctgcgaggaactaagggctccccctagt
gtcctgggaactcgcccgaccgaacgcaagagattaatctccgactccaaggggtcgaag
ggcacgtatcgctacggcgacgtggtcaaggggaaggtgaagaaagtgaagcctacgtgt
gtgctggtgacgctagaggacgggagcacggggtgcgtgcacgtgtccgagatacaggaa
gtggtgtgcgtgggaacattccccacgtccctcctcaagataggaagtgaggtcacagcc
cgggtcatcggaggacgggagggcaacagtcacaggttcttgccgttctcccatcgcaac
ttcacttacttccatgatgccaaacacccagagaagctgttcaagctgggccaggcggat
cccaacctgggtctgctggtgaagctgccattcagcgccatgggaacggttgccatggag
gacctggccgacaaatataagcgaaaacctctggagcggtacagcaagggccagtgctgc
attgtaggagaggcgaatggcaaatggcagttgtccctccgctcttcgaggacggaccca
gagaaggcctcggtagtcaaggaccccgagattgtgtctctagaagacctgtcagagggg
cagatcgtcagaggctatatgaggactgtcaatgcacatggagtctttcatcgacaagaa
aacggtctggtggatctgtctctgctccaagaggacactgggaaaccagacgtgctccca
gaatccctggggctgcacctgcgcctgacaggagaggccaaggagaagcgtgacgccacc
aagaagaggaaacgcacagagtcggagagcaaacagggaactgcagaaaatgtttcgaag
aagacgaagaagacgaagaaggggaagaagggtaaaggggaggacagcgacagcggagtg
gaggtgtacttcagagaagaagaggaggaaaataagttggaggtagagaagcccgtccca
gtgcagccagccagactgcaggtgaccggagggttctcctggtgtagcgctgagcggcct
gaaaccagcatccgctgccctgggggggaggacaacgaggtgaataccaagccccagaag
aagtctcaccatgagcaggaggtggagaagcgggaggctgagaaggccctgaccaagctg
gagacggagctgatggacccaggcctgcgaccccagacggcggctagctttgagcgcctg
ctactaggctcccctaacagctctctgctctggctgcaattcatggccttccacctgcag
gccacacagatagaacaggctagagcggtggctgagagggctctgaagactatctccttc
agagaagagcaggagaagctgaatgtgtgggtggctctgttgaaccttgagaacctgtat
gggacagaggagagtcttcagaaggtgtttgagcgagccgtgcagtattgtgaacccatg
cccgtctaccagcagctggctgacatctacgccaagtgtcagaagactaaggaggcggaa
ggtctgtacaagaccatggtgaagcggttccgtcaggagaaggctgtgtggctgagctac
gggaccttcctgcttcagcagggtcagagtgacgcggccagcgccctgctacagagggcc
atcaagagcctgcctaacaaagacaatgtggatctgatagcgaagtttgcccagctggag
ttccgctacggagacgtagagcgaggaaagaccatgttggacaggatcctgaccagctac
cccaaacgcaccgacctgtggtccgtcttcatagacctcatggtcaaacacggctcccag
aaggaagtccgggctgtgtttgaccgtgtgatccacctgagtgtggcggtgaagaggatc
aagttcttcttcaagcgttacctggagtatgagaagaagaacggcacgccagagagcatc
caggctgtcaaggagaaggctctggagtacgtggagtctaaagggacagaggccgccaga
tag
DBGET
integrated database retrieval system
