Salvelinus namaycush (lake trout): 120041989
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Entry
120041989 CDS
T07522
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
120041989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120041989
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120041989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
120041989
NCBI-ProteinID:
XP_038842790
UniProt:
A0A8U0QGM7
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MALQEEGKTVEEGDCGIPDSCDAVKSCLMRIPHAPACLNSFNNLLKEHNITAPKLSPMPQ
LPTNLSQFPSQVTQLMPSLPQNSPKSSSTLSPRMPKQQQQNRDLELDRLVRQVPLHHRPP
TRTPSPSSPNSTLELPNVPFYPRLPPISLSRQLSGLFNPTFHIEDDPTSALPSVSSRLSV
HPAVNVEDVDSGGEGGGDGGEHHRHHIPQILTLQDPNFKTLTVPGVSKTSRQRKKLYSQS
EEEEEEMEIAVRAWPSQSSILSGDDGLKERPASSASQASYVVNERLQELVKMFKERTERA
KEKLIDPDHSDDDSQTASPARAPTPPPAPPEEPKEEEIEEQQPKPRLCCKVTPPRWIRAL
LHYRFPASIDPFTNLVYVLWLFFVTLAWNWNMWLIPVRWAFPYQNPSNIYLWLLTDYLCD
LIYILDILVFQPRLQFVRSGDIVFDKKDMRVNYMKTFRFKMDVISLVPLELFYFKTGINP
LLRFPRLLKIMSFFEFNDRLEGILTKAYVYRVIRTTTYLLYCLHCNACLYYWGSAYEGLG
STQWVYDGQGNSYIRCYYFAVKTLITIGGLPDPTTLFEIIFQLINYFVGVFAFSIMIGQM
RDVVGAATAGQTYYRACMDNTVKYMASYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLVQ
LPDKMRLDIAVDVNYDIVSKVSLFQGCDRQMIFDMLKRLRSVVYLPGDYVCKKGEVGREM
YIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGGNRRTANVVAHGFANLFILDK
KDLNEILVHYPESQKLLRKKARKMLTKDKKPPKEPAQVIPPRMVTPKLFKAALDVAHQKT
GLKGTLAKIKENINKSSVSLQPSMSSSLPPLSPVSPVSSLDPEREANAMSPTIDSSTLLC
PVSHCHGDETLSKEQGQVAGEVAGESGKKKEKRKA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcaggaggaggggaagactgtagaggagggcgactgtggtatccctgacagc
tgcgatgcagtaaagagctgtctcatgcgtattccccacgcgcctgcatgcctcaacagc
ttcaataacctgctgaaagagcacaacatcaccgctcctaaactttcccccatgccccag
ctccccaccaacctctcccagttcccctcccaggtcacccagctaatgccctctctcccc
cagaactctcccaagagttcttccaccttaagccccaggatgcctaagcagcagcagcaa
aaccgggacctggagttggaccgcctggtccgccaggtccctctccaccaccgtcctccg
actcgcaccccctcaccgtcctcccccaacagtaccctagagctgcccaacgtgcccttc
tacccccgcctaccacccatcagcctgtccaggcagctgtcagggcttttcaaccccacc
ttccacatcgaggacgaccccacgtccgctctaccctcagtgagctccaggctcagtgtg
cacccagctgtcaatgtggaggatgtggattcaggcggagagggaggaggggatggaggg
gagcaccaccgccaccacattccccaaatccttaccctacaggaccccaactttaagacc
ctgaccgtacccggagtgtccaaaaccagccgtcagagaaagaagttgtactctcagagt
gaggaggaagaagaggagatggagatcgcagtgagggcatggcctagccagtccagcatc
ctcagtggagacgatgggctaaaggagcgccctgcgtcgtccgctagccaggccagctac
gtggtgaacgagcgcctacaggagctggtcaagatgtttaaggagaggacagaaagggcc
aaagagaaactcatagacccagatcactctgatgatgacagtcaaactgcctcccctgcg
agagctccaacaccacctcctgcacctccagaggagccgaaggaggaggagatagaggag
cagcaacccaagcctagattatgctgcaaggtgacgcctcctcgctggatcagagctctg
ctgcactaccgcttccccgctagcatcgaccccttcaccaatctggtctatgtgctgtgg
ctgtttttcgtcaccttggcgtggaactggaacatgtggcttatcccggtgcgctgggcc
ttcccctaccagaaccccagtaacatctacctgtggctactcactgactatctgtgtgac
ctcatctacatcctggacatactggtcttccagccccgcctgcagtttgtccgcagtgga
gacatagtgtttgacaaaaaggacatgagagtgaattacatgaaaaccttccggttcaag
atggatgtcatcagtcttgttccactggagttgttctattttaaaactgggatcaaccca
ctcctccgcttcccacgactactaaagataatgtctttctttgagttcaacgaccgtctt
gagggcatcctgaccaaagcctacgtttacagagtgatccggaccaccacctacctgctg
tactgcctgcactgtaatgcctgtctgtactactggggctctgcgtatgaaggtctgggc
tccacgcagtgggtctatgacggacagggcaacagttacatccgctgctactactttgct
gtgaagaccctaatcaccattggtggactgccggaccccacaacgctctttgaaatcatc
tttcagctcatcaactactttgtaggagtgtttgccttttccatcatgattggacagatg
agagacgtggttggtgcagccacagcaggacagacgtactacagagcatgcatggacaac
actgtcaaatacatggcctcctaccgtatccctaaagacgtgcagaaccgggttaaaacc
tggtacaactacacctggcagtcccagggcatgctggatgaacaggagcttctggtccaa
ctcccagacaagatgaggctggacatcgctgtagatgtcaactatgacattgtcagtaaa
gtgtctctcttccagggttgtgatagacagatgatctttgacatgctgaagagactgagg
tctgttgtttaccttccaggggactatgtctgcaaaaagggtgaagttggacgggaaatg
tacatcatcaaagccggagaggtgcaggtggtgggcgggccagacgggaagactgtgttt
gtcacgctgagggcggggtctgtgtttggggaaatcagcttgctggcagtgggtggaggg
aacaggagaacagcaaacgtggtggctcatggcttcgccaacctgttcatcctggacaag
aaggacctcaatgagattctagtgcattaccccgagtcccagaagctgctccgcaagaag
gccaggaagatgctcacgaaagataagaagcctccgaaggagccggcccaggtgatccct
cctcgaatggtcacgcccaagctattcaaagctgctctggatgtggcgcatcagaaaaca
ggcctcaaagggaccctcgccaagattaaggaaaatatcaacaaatccagcgtttctcta
cagccctccatgtcctcctccctgcctcccttgtccccagtctctccagtctccagtctg
gacccagagcgcgaggctaacgccatgtcaccaaccatagacagctccacgctgctctgc
cccgtctcccattgtcacggagatgagacactctccaaggagcagggccaagtggcggga
gaagttgcaggagagagtgggaagaagaaagaaaagagaaaggcatga
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