Salvelinus namaycush (lake trout): 120042039
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Entry
120042039 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-1-like
KO
K06759
contactin 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120042039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120042039
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120042039
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Contactins
120042039
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Others
120042039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
120042039
NCBI-ProteinID:
XP_038842861
UniProt:
A0A8U0QED9
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MSVTVLVLLVLSSSLSHTEAVLFGEPRIFGDDATGYGPIFEEEPLDIVYTKESPDRYISM
NCRARANPAPTYRWRRDNWXIKLMELPMNTTVWWEGNLIINNPEEKKHAGTYVCVAKNVY
GTVISKEAKVKFGYLEEFPDEERDPVTVKEGQGAVLLCAPPQRWPTEVTFRWIYNEFPVF
LHPDKRRFVSQSTGNLYISKVEASDAGNYSCYVFNPQIGKGVYSKFITLISTEETPEKRY
KADLVVKFPDTTAMLNYNGTLECFALGNPAPHIVWRKIGATDLPASAQVSMSGALLHLYN
VQYEDSAGYECEAINQKWQDWHQAWLYVEAAPEWAVTINNTQKDVGSEHTMSCVANGKPV
PYIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENYWGIIYASAELRVIACAPTFELNP
VKKYLLGANNGRVVIACKPRAAPRPRFTWTKGKEVLFNNSRISIMFDGSLEILNATRNDE
GVYTCLAENDRGKANSTGTLTITEATQITVAPEDTQVMVGEEVHLQCQASFDPSLDITFI
WSLDFRVIDFYLEWKHYERIMDREDSGELKIMNAQLRHEGRYTCTAQTVVDNVTASADLK
VKGLPAPPGGVRVEEIRDTSVKLVWNRGADHGSPILGYTIQTRDFYALTEVDWRDASTSP
TALDSMSVMADVVDLYPWMEYEFRVYATNEFGDGEASIPSMKIKTWDAVPVVAPTSVGGY
GGKDGELVITWTPVQPQYFYGKKFGYVVAFKPHDDVDWWYETISDPETRRYVHRDASFRV
KSNDFQVREFQVKVKTFNSKGDGPYSLSTTVYYPRDVPSESPTDVYSRPVSSHEALVWWI
PVMDTGTGLQQYIDGYQVKYWRKYDDTEPGANRIFVPASMNQTRLENMLPDSHYLIEVRA
YNGAGVGPPSEHCEMFTKRAPPSVAPQMWRYISYSGKWLYVWWHHISYDWFGNESFPLYY
KVMFRKTGYITGPIYMTGWHFIDFPMPQVGDYELEVRGRYEGGDGPIRKIRLQGKASFLR
PTLSLATMLLLALCIVGLGI
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcacagtcctggtcctcctggttctctcctcctcactgtcacatactgaggca
gtgttgtttggtgagcccaggatctttggagatgacgctactggctacggtccaatattt
gaagaggagcctctggatatcgtctacacaaaggagtcacctgacagatatatctccatg
aactgtagagcacgggccaaccctgcacccacatacagatggaggcgtgataactggnag
atcaagctgatggagctgcctatgaacactacagtctggtgggagggaaacctcatcata
aacaaccctgaagagaagaaacatgccgggacctacgtctgtgtcgccaagaacgtgtac
ggcaccgtcatcagcaaggaggccaaggtcaagtttggatacctggaggagttcccagat
gaagagagagaccctgtgaccgtgaaggagggccagggggccgtgctgctctgtgctcct
ccacagcgatggccaactgaggtgacgttccgttggatatacaacgagtttccggtcttc
ctccacccggataagcgtcgcttcgtctctcagagcaccgggaatctgtacatctccaag
gtggaggcgtcagacgcagggaactactcctgctatgtgttcaacccacagattggcaag
ggagtctactccaagtttatcactcttatatctacagaagagaccccagagaagaggtac
aaggccgacctcgtggtgaagttccctgacaccacagctatgctcaactacaacggcaca
ctggagtgcttcgctctgggaaatccggcccctcatatcgtctggaggaagataggtgct
accgacctgcctgctagcgctcaggtcagcatgtctggagcgctgctccacctctacaac
gtccagtatgaagactcagcagggtacgagtgtgaggccatcaaccagaaatggcaggac
tggcatcaggcgtggctctatgtagaggctgctcctgagtgggctgtgaccatcaacaac
acccagaaggacgtagggtcagaacacaccatgtcctgtgtcgctaacgggaagcctgtc
ccatacatccgatggctcaaggatggatactcgtatggtaaaggtgagctgaagttctcc
agtctgacgtttgaagactctgggatgtaccagtgtatcgctgagaactactggggtatc
atctacgccagcgctgagctacgtgtcattgcttgtgccccgacgtttgagttgaaccca
gtgaagaagtatcttctaggagctaacaacggccgtgtggtcatagcatgtaaacccaga
gctgcccccagacccaggttcacctggaccaagggaaaagaagtgctcttcaacaactca
cgtatctccataatgtttgatgggagtctggagatcctgaacgccaccaggaatgatgag
ggcgtgtacacctgcttagctgagaatgacagagggaaggccaacagcacggggactctc
accatcacagaggcgacacagatcacagtagccccagaggacactcaggtgatggtagga
gaggaggtgcatctgcagtgccaggcctcctttgaccccagtctggacatcaccttcatc
tggtctctggatttcagggtcatcgacttctacctagagtggaagcactatgagcgcatc
atggatcgtgaggacagtggagagctgaagataatgaatgcccagttaagacacgaggga
cgctacacctgtacagcccagactgtcgtggacaacgtcaccgcgtcagcagacctcaag
gtcaaaggtcttcctgctcctcccggtggggtgagggttgaggagatcagagacacctcg
gtgaagttggtgtggaaccgaggggccgaccatggcagccccatccttgggtacaccatc
cagaccagagacttctacgccctaactgaagtggactggagggacgcatccacctcccct
acagccctggatagcatgtcagtgatggctgatgttgtggacctgtacccctggatggag
tatgagtttagggtctatgctactaatgagtttggagatggggaggccagcatcccttcg
atgaagatcaaaacctgggacgcagtgcctgtggtggccccgaccagcgttggaggctac
gggggtaaagatggagagttggtcatcacatggacacccgtacagccgcagtacttctac
ggtaagaagtttggctacgttgtggccttcaagcctcatgatgatgttgactggtggtat
gagaccatatcagacccagagacacgacgctacgtccatcgagacgcctctttcagggtc
aagtcgaacgacttccaggtcagggagttccaagtgaaggtgaagacgtttaactccaaa
ggagatggaccctacagcctgtcgaccactgtctactacccacgagatgtcccctctgag
tctcctacagatgtatactccaggcctgtctcgtcccatgaagctctggtctggtggata
ccagtcatggacactggtaccggccttcagcagtacatagatggataccaggtgaagtac
tggaggaagtatgacgatacagagccgggggccaatcgtatctttgtgcccgcctccatg
aaccagaccaggctggagaacatgctgccagactcccactacctcatcgaggtcagagcc
tacaacggagccggtgttggccctcccagcgaacactgcgagatgttcaccaagagagca
cctccaagtgtggctccccaaatgtggcgttacatcagctactctggcaagtggctgtac
gtgtggtggcaccacatctcctacgactggtttggcaatgagtccttcccactatattat
aaggtgatgttcaggaagactggctacatcacagggccgatctacatgacgggctggcac
ttcattgacttccccatgccccaggtaggggactacgagctggaggtcagaggtcgctat
gagggtggagacggccccatcaggaagatcaggcttcagggtaaggcgtctttcctgaga
cccactctcagtctggccaccatgctactgctggccctgtgcatcgtgggattggggata
tag
DBGET
integrated database retrieval system
