Salvelinus namaycush (lake trout): 120042236
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Entry
120042236 CDS
T07522
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120042236
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120042236
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120042236
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120042236
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Protocadherins
120042236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
7tm_3
MAP17
DUF6377
EphA2_TM
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
120042236
NCBI-ProteinID:
XP_038843033
UniProt:
A0A8U0U7Z3
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MDLTDFYLLAALVACFWMDPSIAQELIYPIREELQENVLIGNIPKDLNISHTNAATGASA
NLVYRLVSKAGDNPLLRVQSSTGEIFTTSNRIDRERLCPGPSFEENDCSFEIEVVILPND
YFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYQL
VNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVT
VTDVNDNKPVFKESQIEVHIPENSPIGTSVVQLQATDADVGANAEIKYMFGTQVSPATKR
LFALNGTTGLITVQRPLDREETAIHKLSVLASDGSSSPARATITINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDFEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNSPIFSHPVIELAVMEN
NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVTLSILSDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCFSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYAIVSGN
NKGLFRIDPVTGNITLEEKPAISDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNA
TFIYDLIRRTMETPLDRNIGESSETYQSGDYLTIMIAIVAGAMVVIVVIFVTVLVRCRHT
SRFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDPAHEPIN
GNVSLPAELEEQSIGRFDWSSAPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HMIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPVHPSRQVKDNFYWS
ISTAYNCPVQQC
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaccgatttttacttgttggctgctcttgttgcctgtttttggatggaccct
tctatagcccaggaactgatctatcctattagagaggaactgcaggaaaatgttctcatc
ggaaacataccaaaggacctgaacatctcccatacaaacgctgctaccggagctagcgcc
aacctggtctacaggctggtgtctaaagccggcgacaaccctctgctcagagtgcagagc
agcacgggagagatatttacaacctccaatcgtattgacagggagaggctctgtcccggc
ccctcgttcgaggagaacgactgctccttcgagatcgaggtggtgattttacccaacgac
tacttcagattgatcaagattaagatcgtcgtcaaggacaccaacgataacgctcccatg
ttcccgtctcccgtcatcaacatctccatcccggagaatacgttgatcaacagtcgtttc
gccatcccctctgccaccgaccccgacaccggccccaacagtgtacacaagtaccagctg
gtgaacgggcaaagcgccttcgggttggacatcgtggagacgcccgagggggagaagtgg
ccgcagctcatcgttcagcagaacctggacagggaacagaaggatacgtacgtcatgaag
atcaaggtggaggacggaggcacgccacagaaatccagcaccgccatcctccaagtcacc
gtcacagacgttaacgataacaagccggtgttcaaggagagccagatcgaggtccacata
ccggagaactcgcctatagggacgtccgtagtccagctacaggctacggacgcagacgtc
ggggcgaatgccgaaatcaaatacatgttcgggacacaggtgtccccagctaccaagaga
ctatttgctttaaacggcaccactggccttataaccgtacagcggcccctcgatagagag
gagaccgccatacacaagttatctgtgttagcgagcgacggcagctccagcccagccaga
gctaccataactataaacgtgacggacgtgaacgacaatccaccaaacattgatctgaga
tacatcatcagtccaataaatggcactgtcttcctctcagagaaagacccaatcaacacc
aagatagctttgatcaccgtgtcggacaaggacacggatgtcaacggtaaagtcatctgt
ttcatcgagaaggacgtcccctttcacctcaaagcggtgtacgacaaccagtatttacta
gagacatcggcgctgctcgactttgaggggaccaaagagtacaacttcaaaatcgtagcc
tccgactctggcaagccgagcttgaaccagacagcgttggtaagggtgaggctggaggac
gaaaatgacaactctccgatcttcagccatcctgtcatcgagctggccgtcatggagaac
aacaaacgcgatctcttcctcacgactctcagcgccaccgacgaggacagcgggaaaaat
gcggagatcgtctaccagctgggccctaacgcctcgttcttcgacctggaccgtaaaacc
ggtgtcctcacggcctcccgggtgttcgatcgtgaggaccaggatcggttcctattcacg
gtaacggcccgagacaacgggacgcctccactccagagccaggcggcagtcatcgtgaca
gtactcgatgaaaatgacaacagccccaagttcacccacaaccacttccagttctttgtg
tcagagaacctgcccaagtacagcacggtgggggtgataaccgtcacagactcagacgcc
ggggaaaatgccgccgttacgctttccatactcagcgacaacgagaactttatcctagac
ccgtactctggagtaataaagtccaacgtgtccttcgaccgggagcagcagagctcctac
accttcgacgtccgggcggtggatagcgggcggccgccatgtttctcggccgccaaggtg
accatcaatgtcatcgacgtgaacgacaacacccccatcgtcatctaccccccttccaac
acctccttcaaactggtccccctctcgtccatccctgggtcggtggtggccgaggtcttt
gctgtggacggtgacacggggatgaacgcagagctcaagtacgccatcgttagtggcaac
aacaaaggtctgttccggatcgaccctgtgacaggaaatatcaccttggaggagaagcct
gctatctccgacatcggcctccatcggctggtcgtgaacattagcgacctgggctaccct
aagtccctgcacaccctggtgctggtgttcctctatgtgaacgacacggtcggcaacgcc
acgtttatctacgacctcattcgccgcaccatggagacgcccctggacaggaacatcggg
gagagcagtgagacttaccagagtggagactatctaaccatcatgatcgccatcgtagcc
ggggcgatggtggtgattgtggtgatcttcgtgacagtcctggtgcgctgccgtcacacc
tcgcggttcaaggcggcccagagaaagaagcagggcgccgagtggatgtctccaaaccaa
gagaacaagcagaacaagaagaagaagcgtaagaaaaggaagtcgcccaaaagctccctc
ctgaactttgtcaccatcgaggagaacaagccggatgacccggctcacgagcccatcaac
ggcaacgtcagcctgcctgccgagctggaggagcaaagcatcggtcgctttgactggagc
tctgctcccactaccaccttcaagccctccagtccagatctagcccggcactacaagtcc
gcttctccgcagtccgcgttccacctcaaagcggacacgccggtctccgtgaagaagcat
cacatgattcaggagctccctctggacaacaccttcgtagggggctgtgatactctctcc
aagagatcctccactagttcagaccacttcagtgcctcggagtgcagttcccagggagga
ttcaagactaagggacccgtacacccgtccagacaggtaaaagataacttttactggtct
ataagtactgcgtataactgcccggtccaacagtgctga
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