Salvelinus namaycush (lake trout): 120042399
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Entry
120042399 CDS
T07522
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120042399 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
snh04031
]
120042399 (rab40c)
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
120042399 (rab40c)
GTP-binding proteins [BR:
snh04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
120042399 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120042399
NCBI-ProteinID:
XP_038843165
UniProt:
A0A8U0QHF2
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All DBs
Position
3:91375808..91395279
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AA seq
279 aa
AA seq
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MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDIANRWSFEGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWKPNRVFTLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANAGGGSKGNSLKRSKSIKPPQSPPQNCTRNNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggtacccagggcagcccggtgaagagttatgactacctgttgaagtttctcctggtc
ggggacagtgatgtggggaaaggggagatactagacagcctacaggatggatctgcagag
tccccatacgcttacagcagcggcatcgactacaagaccaccactattctgctggatggg
aggagagtgaaactggagctgtgggacacgtcaggacagggaaggttctgcaccatcttc
aggtcctactccagaggggctcaggggatcctgttggtgtatgacatcgcaaaccgctgg
tcgtttgaaggcatcgaccgctggatacgagagattgacgagcatgccccgggtgtacct
cgtatcctggtcggtaaccggctccacctggcgttcaagcgtcaggttcctacggagcag
gcccgggcgtacgctgagaagaatggcatgaccttcttcgaggtcagcccgctctgcaac
ttcaacgtcatcgagtcgttcacagagctgtctcgcatcgtactgatgaggcacggcatg
gagaagttctggaagcccaacagagtcttcactctccaggacctgtgctgcagagcgatt
gtctcctgcacgcccgtccacctgattgacaagctgccgttgcccgtggcgataaagtcc
cacctcaagtccttctctatggccaatgggatgaacgcggtgatgatgcacggacggtcc
tattcgctggccaacgcggggggcgggtctaaagggaacagtctgaagcgttctaaatcc
atcaaacccccccagagccccccacagaactgcacacgcaacaactgtaaaatctcctag
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