Salvelinus namaycush (lake trout): 120042472
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Entry
120042472 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120042472
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120042472
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
U-box type E3
120042472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
U-box
zf-C3HC4_3
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
120042472
NCBI-ProteinID:
XP_038843231
UniProt:
A0A8U0QIF4
LinkDB
All DBs
Position
Unknown
AA seq
1885 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLAELKRQIMGRERLKATDCDLQITNAQTREEYTDE
EIHIPKHSSVIVRRTPIGGVKPAGRTFIVDRSDMAAGSSRPTDSSPSVSLAQLSKTANLA
EANASEDDKIRAMMSQSNSEYDPIHYSKKAIGPPPAHYTCYRCGKNGHYIKHCPMQMDKS
IEAPKPVRTSKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYALGKKERPPFVPRE
ASSSEDEADPIPDELLCPICNDLMTDAVVIPCCGNSYCDDCIRTSLLDSEEHTCFTCKQS
DVSPDALIANKFLRQAVNNFKNESGYTKPARNKTLQQSAPPPARPQPFRTLGSRQQDPLL
ANSRQQDPLLASARQQDPLLASARQQDPLLANARQQDPLLANARQQDPLLANARQQDPLL
ANARQQDPLLANARQQDPLLANARQQDPLLANARQQDPLSANARQQDPLLVNTSRPPASL
TPPVTLTQSLPIQTPPIGPPEVSISPDPTPEPHRAEPRHLANHNEPPPPGEMEAGPYMIS
EPPIRSADSGPQGYHMPMIGHPPPIRPSHPSGPPPQPSHSHRGGPRPPWDRPYRPLSDHV
PPPHHPPPSAPGPAPHLYPGPNLYHPPPNPHSIPPQSYPPPYSTGPPPPVNYPPQPLYQH
GQMPPGVNAPWVPPPNTQPLSLGPPPLLPSGPPLSKEDFYRQRRLRQDQVTSKLDEFTKD
FAKELMEYRPAPKRRRRSYSRSRSYSRSPFSRSPYSRSRSPRSRSRSYSYTPSRSRSRSR
SYGRSPFSRRNGGRGGRSRSYGRSPRSRSRSRSYGYRRSGSPRSPPPYRGGGGGGGGWEG
GDGAEGGGGYRPRSRSPGGYRRSRSPGGVRGHHKPPPREPPPYEHKGGPDLSPGGRERWE
RDSYRQWEKEYRDWYNKYYKDYSTQHASVHHRGGRGSRERDRLSPPPRDYSPQGRVRRGE
RGGPPGPHRTHHALSALPSASVRGNGSKERTQGDASKERTQGGTKTSEGGTKTLKGKKLK
KKKNGEELDSANQSLDRGDATPVRDEPMDELHTLTPSKAPPTSTKVSTNKAALLSGKTPP
TSSSQSEKSRKEKGGKVKVKTEGKVKGEKVKRKTGGEATVTASKNKESSATKSTKASKVK
PDEPIKREKGRSTPTVRGSLAKLPLPRTLPPHPHDLPKHLGDPRGGRRDPIHGVGVRLPG
RPLQPAPPSPAEKRRRVEERERGRGMDRGMGGPPAKLRRAEGPYPQRGLPAKPHLLNLAC
RETGRGEGLLPIPGTSQTGRLDRFHPISISIPGPGSSMDLGREGRGDGLLPTPGSSEAGR
RESDRGSIWPLMGLQVKPFPQRRIKLNRDLGRNSTMSRPEERPAPATNITTTTITTTGER
PAAPERGGAERDGGMERVAVMVERRSSGERSEVRSVRSERPSSGERLPERGGGGGRSVSL
DRMTIAERSAIAKKPDVTRERTESEYTPPTERERPAESSKERERPASAKTDRSSSRERSA
TREQKGERGGEKTSSSVDRPASTGERAAGTQRETVAEDRAAAAVKESSGSGKTRKISRKS
SEPTVHHSSDHSVTSTGSSRAVEERSEPGQSQGAVSKPRDLQTQRRPSPVQFPSPGRERD
RGTGGVLIQPPPRSKWEREEEEEEEEQHSASRENGALAVSSSVPRDALRREASPAPPSGQ
GREVQGSVSKTANTEGRRGKEEGTRRREEGRGLKKGQVNFRKPAKTESRGVKEEGRGGVG
REESRGAGLEPRRQRLCSDLGRETDEAAFVPDYSEGEGSDGERGSGLSHSPSHNTQSPAS
QSPGGSPSNHSGSTATDKKKKKKHKKHKKHKKHKKHSADAEPPAEGRKEHKHKNKKKKHR
KNKEEEEEGGGGEAEEKTGQESATI
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcattataaattctcgtccaaactggactacaacaccgtgacctttgac
gggctgcacatcaccctagccgagctgaaacggcagattatgggcagagagcgcctcaaa
gccaccgactgtgacctgcagatcaccaacgcacagacccgtgaagagtacactgatgag
gagattcacatccccaaacactcatcggtgatcgtcagacgcacccccatcggaggggtc
aaaccagcaggcagaacgttcattgttgaccgttctgacatggctgctggatcctccaga
cccaccgactcgtcaccgtccgtctccctggcccagctctctaagactgccaacctagcg
gaggccaatgcatcagaggatgacaagatcagagccatgatgtcccagtccaacagtgaa
tatgaccccatacattactctaagaaggccatcggaccgcctcctgcacactacacctgc
tatcgctgtggcaagaacggacactacatcaaacactgccccatgcagatggataagagt
atagaggcccctaagccagtcaggaccagtaaggggatccctcagagctttatggtgaag
gctgaaccaggaactaaaggagccatgttgaccagcactggagaatatgctattcctgct
atagacgcggaggcctatgctctgggtaagaaggaacgtcccccctttgttcctcgtgaa
gcgtcatcgtctgaagatgaggctgatccaatccccgatgagctgctctgccccatctgt
aacgacctgatgactgacgctgtggtcataccctgctgtggcaactcctactgcgacgac
tgtatcaggaccagtctgctggactcagaggagcacacctgtttcacctgcaaacagtct
gatgtctcacctgacgctctcatcgctaacaagttcctacgacaggcagtgaataacttt
aagaatgaatctggttacaccaaaccagcacgaaacaaaaccctgcagcagtctgccccg
cccccagcacggcctcagccattcagaaccctcggctcacgccagcaggaccccctattg
gccaacagtcgccagcaggaccccctattggccagcgctcgccagcaggaccccctattg
gccagcgctcgccagcaggaccccctattggccaacgctcgccagcaggaccccctattg
gccaacgctcgccagcaggaccccctattggccaacgctcgccagcaggaccccctattg
gccaacgctcgccagcaggaccccctattggccaacgctcgccagcaggaccccctattg
gccaacgctcgccagcaggaccccctattggccaacgctcgccagcaggaccccttatcg
gccaacgctcgccagcaggaccccctgttggttaacacctctcgccccccagcctccctc
actcctcctgtcaccctgacacaaagcctgcccattcagaccccaccgattggaccgcct
gaggtgtcaatctctcctgaccccacgccagaaccacaccgggcggagccacggcacttg
gccaatcacaacgagccgccgccgccaggtgagatggaggcggggccttacatgatatca
gagccaccaatcagatcagccgacagcggacctcagggataccacatgcctatgattggt
caccctccacccataaggccctcccacccatcaggtccacctccacagccctcccattcc
cacagaggaggacccagaccaccttgggacagaccctacagacctctttctgaccacgtt
ccacccccacaccacccccctccttctgccccgggcccagcccctcacctctacccgggc
cctaacctctaccaccctccccccaacccccactccatccctccccagtcctacccccct
ccctactccaccggaccccctccccctgttaactaccccccccagcccctctatcaacac
ggccagatgcctccgggggttaatgccccctgggttccccctcccaacacccagcccctc
tcgctgggccccccgcccctcctaccctccggaccccccctctccaaggaggacttctac
agacagaggagactccgacaggaccaggtaacgtccaagctggatgagttcactaaagac
tttgccaaagagctgatggaatacagacctgctcccaagagacggagacgctcctactcc
aggtctcgttcctacagtcgttctccatttagccgttccccctactcccgatcccgttct
cctcgctcccgctccaggtcttactcctacacccccagccgctcccgctcacgttccagg
tcttacggacgctcacctttctccagacgcaacggaggccgggggggacgcagccgctcc
tacggccgctcgccgcggtcccgctcacgctcccgttcctacggctaccgtcgctccggc
tctcctcgctcccctccgccttaccgaggtggtggtggtggtggggggggctgggaagga
ggagacggagctgaaggaggaggggggtatcggcccaggtctcgctccccggggggctac
aggaggagcaggagtccaggaggggttagaggtcaccataagcccccccctcgagagccg
cctccttacgagcataaaggtggacctgacctgtctcccgggggcagggagcgctgggag
agagatagctacagacagtgggagaaagagtacagggactggtacaacaagtactacaaa
gactacagtacccagcatgcctcggtgcaccaccgcggtggccggggcagcagagagagg
gaccgcctctcccctccacccagagactactccccccaggggcgggtgaggaggggtgag
agagggggacctcccggaccccacagaactcaccacgccttgtccgctctgccctctgcc
tccgtcagggggaatggaagtaaggagcgcacgcagggggacgctagtaaagagcgcacg
caggggggaaccaaaacgtcagagggtggaactaaaactctgaaagggaagaaactgaag
aagaagaagaacggggaggagctggattcagccaaccaatcactggacaggggtgatgcc
acacccgtcagggacgagccaatggatgaactccacaccctgacccctagcaaagcccca
cccacctccaccaaggtctcgaccaataaggcagcgctgctgtctggtaaaacccctccc
acctcgtccagccagtcagagaagagcaggaaggagaaggggggcaaggtgaaagtaaag
acggaaggcaaggtgaaaggagagaaggttaagagaaagacaggaggagaggcgacggtc
acagcctctaagaacaaagagtcttcagccactaaatcaaccaaagcgtccaaggtcaaa
ccagacgagccaatcaagagagagaaggggcgtagcacccctactgttagaggaagtttg
gctaaactccccctgccccgcaccctcccccctcacccccacgacctccctaaacacctg
ggtgacccccgcgggggaaggagagaccccattcacggtgtcggggtacgcctccctggt
cgccccctccagcctgcacctccctccccagcagagaagaggaggagagtggaggagagg
gaaagggggagggggatggacagagggatggggggccccccggctaagctgcgccgtgcc
gaggggccgtacccccagagaggacttccagccaagcctcacctcctgaacctggcatgc
agagagacgggtagaggagagggtctgctccccatccctggaacctcgcagacagggagg
ctagatcgtttccatcccatctccatctccatccctgggcctggttcctccatggacctg
gggagagaggggagaggcgacgggctgctgcccaccccagggagctctgaggcgggcaga
agagagagtgacagggggtctatctggcctctcatgggtctgcaggtcaaacccttcccc
cagaggagaatcaaactgaacagagacctggggaggaacagcactatgtcccgcccagag
gagagaccagctccagctactaatatcaccactactactatcaccactactggagagaga
ccggctgctcccgagagaggaggagcagagagggatggagggatggagagggtggcggtg
atggtggagcggaggtcgtctggggagaggtcagaggtcaggtctgttaggtcagagagg
ccgtcgtcaggggaacgtttgccggagagaggaggaggaggaggaaggtcagtctctcta
gaccgcatgaccatcgcggaacgctcggccatcgctaagaaacctgatgtcaccagggag
agaacagagagtgagtacactccgcccactgagagagagagaccagctgagagctccaag
gagagagagagaccagcgtcagccaagacagacaggtcatcatccagggagaggtcagcc
accagggaacagaaaggagagcggggaggagagaagacctcgtcctccgtagacagacct
gcctctacaggagagcgagcggcagggacccagagagagactgtagctgaagacagagca
gcagcagcggtgaaggagagttctggttctgggaagaccagaaagatcagcagaaagagt
tctgagcccacggtccaccactcatcagaccactctgtcacttcaactggcagcagcagg
gctgtagaggagaggtctgagccgggccagagccagggtgccgtgtctaaaccccgggac
ctccagacccagaggagacccagtcccgtccagttccccagcccaggcagggagagggac
cgtgggaccggaggagtcctcatccagcctccaccccggtccaagtgggagagagaggag
gaggaggaggaagaggagcagcactcagcgtccagggagaacggggcgttggcggtttcc
tcctccgtgcccagagacgctctgaggagagaagcctcaccagcaccacctagtggccaa
ggcagggaggtgcagggtagtgtctctaaaacagccaacacagaggggaggagagggaag
gaggaggggactaggaggagggaggaaggcagagggcttaaaaaggggcaggtgaacttt
agaaaaccagctaagaccgaatccagaggggtgaaggaggaaggaagaggaggggtaggg
agggaggagagtcgaggggcggggctagagccaaggcgacagcgtctgtgttctgacctg
ggtagagagacggacgaggcagccttcgtccctgactacagcgaaggggaggggtcagac
ggggagagaggcagtggcctgagccatagcccctctcacaacacccagagccccgcctcc
cagagccccggcggctcccctagcaaccacagcggctccacggcgacggacaagaagaag
aagaagaaacacaagaaacataaaaaacacaagaagcacaagaagcattctgccgacgct
gagcctcccgccgaaggaaggaaggaacacaaacacaagaacaagaagaagaagcacagg
aagaataaagaggaggaggaggagggaggaggaggggaggcagaggagaagactgggcag
gagtcagccaccatctga
DBGET
integrated database retrieval system
