Salvelinus namaycush (lake trout): 120042522
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Entry
120042522 CDS
T07522
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120042522
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
General mRNP proteins
120042522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
RSRP
Motif
Other DBs
NCBI-GeneID:
120042522
NCBI-ProteinID:
XP_038843286
UniProt:
A0A8U0QH64
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MADDFDIEAMLEAPYRKDEIKPSSPNGHEERSKKKKKSRSRSKDRKRSKSRDRKKSHDHK
RSRSRERKRSRSKERRRSRTRSRERSGRYRDHKTTFSGPKFNGGSRGKIGPPPVIKLSRR
RSRSRSPFKKEKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVR
MISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAEKNRAAAMANN
LQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDA
ECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPAMNMNMNMNMNTAMNLPSQPLA
THCFQLSNMFNPQSEDDPGWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYVKCPTIP
AAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSVTATQLLIPPARR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgatatagaagcaatgcttgaggctccgtatagaaaggatgagatc
aagcccagtagtcccaatggccatgaggaacgcagcaagaagaaaaagaagagcaggagc
cgaagcaaagaccggaagagaagcaagagccgtgatcgcaagaagagccatgaccacaag
aggagccgcagccgcgagcgaaagcggagccgcagcaaggagaggcgccggagccgcact
cggagcagggagcgcagcggccgctacagggaccacaagactaccttctctgggccgaaa
tttaacggtggttccagagggaagattggccctccacctgtcatcaagctaagccgaagg
cgttccagaagccgaagccctttcaagaaagagaagagtcctgtgaggcagccaattgac
aacctgactccagaggaaagggatgctcgcactgtgttttgcatgcagctggcagccaga
atccgtccacgagacctggaagagtttttctctgcagtgggaaaagtgagagatgtgcgc
atgatctctgacagaaattcgaggaggtcgaaggggatagcttacattgagtttgtggag
gccaactctgtgccgctggctataggattgtctggtcagcgacttctgggggtgccaatc
attgttcaggcctcgcaggtaatggctgaaaaaaacagggctgctgccatggccaacaac
ctgcagaagggcaacgctggcccgatgaggctctacgtcggatccttacactttaacatc
acagaggagatgctgagaggaatttttgagccttttggacggattgagagtattcagctc
atgatggacagtgagactggaagatctaaaggatatggcttcatcactttctcggacgca
gagtgtgccaagaaggccctggagcagttgaacgggtttgagctggccggccggcccatg
aaggtgggccatgtcacggagcgcacagatgcctccaccgccagttcattcctggacagc
gacgagctggagaggacaggcattgacctaggcaccaccgggcgcctgcagctcatggcc
agactggctgaaggcacgggactgcaaattcctccagccgcacagcaagccctacagatg
agtggggccattgctattggtgccatggctgctgtatcagctgccatgaatcctgctatg
aacatgaacatgaatatgaacatgaatacagctatgaacttgccatcccagccactagct
acacactgtttccagctgtctaacatgttcaaccctcagtctgaagatgacccaggctgg
gatgttgacattcagcatgatgtcattgaggaatgcaacaaacatggaggagttgtgcac
atatacgtcgataagaattccactgaaggcaacgtgtatgtgaaatgtccaaccattcct
gctgccatggctgcagtaaacgcattacatggtcgatattttgcaggtaaaatgatcaca
gcggcatacgtccctctcccgacatatcacaacctttttcctgattctgtgacggctacc
cagctcctgatccctcctgctcgccgatga
DBGET
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