Salvelinus namaycush (lake trout): 120042588
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Entry
120042588 CDS
T07522
Name
(RefSeq) sorting nexin-18-like isoform X1
KO
K17923
sorting nexin-9/18/33
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120042588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120042588
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120042588
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120042588
Macropinocytosis
Sorting nexins
120042588
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120042588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_2
SH3_9
SH3_1
Vps5
XFP
HBM
Motif
Other DBs
NCBI-GeneID:
120042588
NCBI-ProteinID:
XP_038843339
UniProt:
A0A8U0U7I8
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MALKARALYDFNSENTGEISLKEHEIVSLYSEQDIEGWLEGSNGKGERGLFPASYVEILN
NETASTFNNSTSEDTYPGSRYDNIPTGDFGDTSNKTLNQIENLSKSSTSSGLTASSPPAP
AQQQRGYQASQGSDEDWDDDWDDTSTVADEPGVVGGSHQGDFDGNGSSTYSVSTSSMSRS
GNVQPAKSSATVSRNLNRFSTFVKSGGEAFVLGEAAGFVKDGDKICVVTGQYGPEWQENP
YPFACTIDDPTKQTKFKGMKSYIAYKLTPTHTQIQVNRRYKHFDWLYARLVEKFPVISVP
HIPEKQATGRFEDDFISKRRKGLIWWMNHMTSHPVLSKCDVFQHFLTCNSMDQKSWKQGK
RKAEKDEMVGANFFLTISTPSGPPLDLVEVESKIDGFKAFTKKMDDSVVQVNATTNEFAR
KQITGFKKEYQKVGQAFKVLGQAFELDQQAYSVGLNQAIAYTGEAYDAIGGYFAEQPRHD
VDPLMDLLQLYQGHLANYPDIIHVQKGALTKVKESQKHVEEGKMDAPQADGVNERCDIIS
FATLAEIQHFHQVRVRDFKAQMQRYLTEQIGFFQKITGKLEEALQKYDTA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaaggcgagggctttatacgacttcaattccgaaaacacaggggagatatca
ttaaaggaacatgaaatagtgagtttgtacagcgaacaggacattgaaggatggctagaa
gggtccaacggcaaaggcgagagaggtctcttccccgcgtcctacgtcgagatactgaat
aacgagaccgcgtccacgtttaacaacagcacatcagaggatacttacccgggatcccga
tacgacaatattccaaccggagatttcggggacacctcaaataaaacattaaatcaaatt
gaaaacttgtccaaatcatcaacatcgtctgggttgacagcgtcctcaccgcctgcccca
gcgcagcagcagcgcggttaccaagccagccagggcagcgatgaagactgggatgatgac
tgggatgacacctcgacggtggctgacgagcccggggttgttgggggaagtcaccagggg
gactttgatggcaacggatcgtctacatacagcgtgtcaacatcgtctatgtccagaagt
ggcaacgttcaaccagccaagagctctgccacggtcagtagaaacctcaataggttttca
acatttgtgaaatcaggaggggaagcgttcgtgttaggtgaggcagctgggtttgtgaaa
gatggggataagatatgtgttgtaacgggacaatacggtccagaatggcaggaaaacccg
taccccttcgcctgtaccatcgacgaccccaccaagcagaccaagtttaaagggatgaag
agttacattgcctacaagctgacgcccacccacacacagatccaggtaaacaggaggtat
aaacactttgactggctctatgcccggctggtggagaagttccctgtcatctcggtgccc
cacatcccggagaaacaggccacggggcggtttgaagacgacttcatctctaaaaggagg
aaagggttgatatggtggatgaatcacatgactagtcacccggtcctgtccaaatgtgac
gttttccagcacttcctcacttgcaacagcatggaccagaagtcatggaagcaggggaag
aggaaggcagagaaggacgagatggtgggggccaacttcttcctcactatctccaccccc
tccggaccccccctggacctagtcgaagtcgagtccaagatcgacggcttcaaagcgttc
actaagaaaatggacgacagcgtggtccaagtcaacgccaccaccaacgaattcgcccgg
aaacagatcacagggtttaagaaggagtaccagaaagtgggccaggcgtttaaagtcctg
gggcaggcgtttgagctggaccagcaggcatactcggtagggttgaaccaggccatagcg
tatacaggagaagcatacgatgctattggaggctactttgcagagcagccaagacatgat
gtggaccctttaatggatttgttacagctgtaccagggacatctggccaactaccctgac
atcatccacgtacagaaaggagcacttaccaaggtgaaggagtcccagaagcacgttgag
gaaggcaagatggacgctccccaggcggacggcgtcaacgagcgctgtgacatcatctcc
ttcgccacgctggcagagatccagcacttccaccaggtcagggtgagggacttcaaggcc
cagatgcagcggtatctaaccgagcagattggcttcttccagaagatcacaggcaagctg
gaggaggccctgcagaagtacgacaccgcttag
DBGET
integrated database retrieval system
