Salvelinus namaycush (lake trout): 120042908
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Entry
120042908 CDS
T07522
Name
(RefSeq) transcription factor COE1-A-like
KO
K09103
early B-cell factor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120042908
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120042908
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
120042908
NCBI-ProteinID:
XP_038843602
UniProt:
A0A8U0QHR0
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MFGIQENIQRSGSVMKEEPLLTGMNAVRSWMQGAGLLDANTAAQSGVALARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKETSGEKTNNGIQYRLLLLYSNGI
RTEQDFYVRLIDSMTKQAITYEGQDKNPEMCRVLMTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLSVSDNIFVHNNSKH
GRRARRLDPSEGTPSYLEHATPCIKAISPSEGWTTGGATVIIIGENFFDGLQVIFGTMLV
WSELITAHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGCYIYTALNEPTIDYGFQRLQ
KVIPRHPGDQERLPKEVILKRAADLVEALYGMPHNNQEMILKRAADMAEVLYTTVPRGHN
QLLGSGSVHASMMAVNSFPGSEVTQTANQGYSRSSSSASPHGYVPSTTPQQTSYSSVSTS
MNGYTDSGMTTLGTSPNFLNGSATNSPYAIVPSSPTMASTTNLPSNCSSSSGIFSFSPAN
MVSAAVKQKSAFAPVIRPQTSPPLTCTSTIANGLQVIPGMIDPSM
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatccaggagaacatccagaggagcgggagtgttatgaaagaagagcccttg
ttgaccgggatgaacgccgtgcggagctggatgcagggcgccgggctgctggacgccaac
acagccgcccagagcggagtggctctagcccgggcacatttcgagaaacaaccgccctcc
aaccttcgcaaatccaacttcttccacttcgtgctggctctgtacgacagacaagggcag
ccggtggagatagagagaaccagcttcgttggatttgttgaaaaggaaaaggaaacgtca
ggggaaaagaccaacaatgggatacagtacaggctactgctcctatacagcaatggtatc
aggacagagcaggacttttacgtgcgcctcatcgattccatgaccaaacaggcgatcacc
tatgagggacaggataagaaccctgaaatgtgtcgggttttaatgactcatgagatcatg
tgcagtcggtgttgtgataagaagagttgtggcaacagaaacgagacaccctctgacccc
gtcatcattgacaggttcttcctcaagttcttcctgaagtgcaaccagaactgtctgaag
aacgcagggaacccacgagacatgagacgctttcaggtggtcgtgtctaccacggtgagt
gtggacggtcatgtcctctctgtctctgacaacatctttgtccacaacaactctaaacac
ggtcgccgggccaggagactagacccctcagaaggaacaccctcgtacctggagcatgcc
accccctgtatcaaggcgatcagccccagtgagggctggactacaggcggtgccacagtc
attatcataggagaaaacttctttgatggactccaggtcatatttggtaccatgctagtc
tggagtgagctgatcacagcccacgccatccgggtgcagactccccccagacacatcccc
ggggtcgtagaggtcacgctgtcatacaagtcgaaacagttctgcaagggcacacctgga
tgctacatatacacagcgttgaatgagcccactatagattacggcttccagaggttacag
aaagtcatccccagacatccaggagaccaggagagactacccaaggaagtcattctaaag
agagcggcagacttggtagaagcgctctacgggatgccacacaataaccaggagatgatt
ctgaagcgggcagctgacatggcagaggtgttgtatacgacggtgccacgcggccacaac
cagctgttaggcagcggctccgtccacgccagcatgatggccgtcaactccttccccggg
tcagaggtcacacagacagccaatcagggttacagtaggagtagcagcagtgcatctcct
catggttatgtccccagcaccactccacagcagaccagctacagctctgtttccactagc
atgaacggctacactgactctggcatgaccacgctaggaacctcacccaacttcctcaac
gggtcagccaccaactcaccctacgctatcgttccctccagtcccaccatggcctccacc
accaatcttccctctaattgcagtagttcttcaggcatcttctccttctctccggccaac
atggtgtctgctgcggtcaaacagaagagcgccttcgcccccgttatacggccgcagacc
tcccctccactcacctgcaccagcactattgctaacggactgcaagtgattcccgggatg
attgatccatccatgtag
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