Salvelinus namaycush (lake trout): 120042912
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Entry
120042912 CDS
T07522
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120042912
Membrane trafficking [BR:
snh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120042912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_8
TPR_2
SH3_9
SH3_2
SH3_1
TPR_MalT
TPR_10
TPR_19
Motif
Other DBs
NCBI-GeneID:
120042912
NCBI-ProteinID:
XP_038843606
UniProt:
A0A8U0QJ70
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MIPVVEGVEGPGEESGSGEAEPDSYWKRKEAFTRGSTVSLSVGERFSSDVVLVFSGRRRS
GVIPDSEIQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVITFKTVEEMWKF
STYLALGYVARCLENFLCDQSFWLDAELLRDLEITVTVDEEHLATLYLGLLLQEGSFFAK
ALVSSGEHSDEEEELCFRRNDLLMVRDTGQDSHWEGTLLSTGQHGLVPVNTMQPLPYPFY
QWFLRKYPGCAGCSPSERGQFDQPVVTGSCEAVVDHNPVGCDELQLSRGDLIEIQGMLLR
GLDLFIGTHCSTGNTGFVHKAHVKPLNAKPLDGHLVFLSEEERASLSQVNPCSTEPRDSG
LLERLFSSDISTVYRLDRLDQSDFTYIRNQPKQEHKPPTSTRQSIISEKNDATLPYHSSY
ASQNALGRGGDGELLSFSLDNTFREMNEFQEDPSLFLEEGSWEGEESEICDPTLSLLNMH
HFQEEFLPLYDLHHSFLWLTFSGQSEEELLGHLEIVREGAKRTGMAWAHRRACFLLGRLC
AKKLKYSQARVYYEEALGVSVDGFSDLPLLIALYTNLTAVYLKQKMADKLPPTLEKASAL
LLCLPSHTFTSLDEFELLKLVLRRSMVEGDKHLEARACYLTASLFLLLRKIDDALPFAER
LQFLTVTLSAEKGRPIAPLDLNWLLSRLYNRKYMPYLALASLSLDTGQDHSLQDAFHRIE
LFSRNSVRLNPRWKEGTSLLPAQIVVYLQQALAIAERGDDLKTQRDLCLGLACVYQQHGA
LEKALPCAQQAVQTGGGINEEEGFEASVLLGWLLVLTGQPERAQNTLQPLLQSLQGTDSP
TQRGVIHNLLALCLRQQGGIPEAGSHLHYALTISRESGNQRNQALALANLGCLALGVGAP
TLAERFLFRSLWLFLEIWESPVDEEHVQTYLWLGRSYKDRGRSQDARLCYEMGLLISLQA
RNLPSQMVVAEVLSRHYADVLLYGQSILYYEHCVSVSRDLKDKRLEGEYLEILSSLYLSL
NTEKSSRKSLDYSKQSLRISIDLGKKEEESETWLQVGRIYYLIHEDELADMYLQAAVKTA
LRMNDPRFAMSIYEEAGDVFFKGNRNRLASLPFYRDGSLPFARSIRDVDSEFRLLSKLTE
LLMTQEEHEEALQYAILAVQISTKTGVCVKERAAYHRLATVYYSLEQYEMTENYYLKSLS
LSPAVLQHPLEARYYTKLYCRLGDLTLHKLKDAYDSMGYFQLAQAAALEDRANPQALYVV
YMKLAEIHANHMPDPLLCQTYRDRAQSLRRELSGLGETDGRGAVTEG
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtggtggagggggtggaggggccgggggaggagtctgggagcggggaggcg
gagccggacagttactggaagaggaaggaggcgttcaccagaggaagcaccgtgtcactg
tccgtgggagagaggttctcctcagacgtggtgctggtgttcagcggtcggcggcgctca
ggtgtaatacctgactctgaaatacaggaggcgctccgtaccagactcagggtcgtcgag
agcaacagtcaggacgtcatccagctcttcaaggacctgtctgcccgtctggtgtctgtc
cacgctgagaaggacagctttgtcatcaccttcaagactgtagaggagatgtggaagttc
tctacctacctggctctaggctatgtggcgcggtgtctggagaatttcctgtgtgaccag
tcgttctggctggacgctgagctgctgagggacctggagatcactgtgactgtagacgag
gaacacctagccacactctacctgggactgctgctgcaggaggggtcgttctttgccaag
gcgctggtgagcagtggcgagcacagtgatgaggaggaggagctgtgtttcagacgtaat
gacttgctgatggttagagacacggggcaggacagtcactgggagggcacccttctctcc
actgggcaacacggactagtgcctgtcaacaccatgcagccgctgccataccccttctac
cagtggttcctgaggaagtaccctggctgtgccggatgctccccttcagagagaggacag
tttgaccagcctgtagtaactggttcctgtgaggctgtagtggaccataacccagtaggt
tgtgatgagctccagctgagtcgaggtgacctgattgagatacaggggatgctactccga
ggtctggacctgttcataggaacacactgctctacaggaaacactggcttcgtacacaag
gctcacgtgaagccactcaacgccaaaccactagatggacaccttgtgtttctgagtgag
gaggagcgtgcgtctctttcccaggttaacccctgcagtactgagcccagagacagtggc
ctgctagagagactcttctcctctgacatcagtactgtctacagactagacagactggat
cagtctgattttacgtacatcagaaaccaacctaaacaagagcataagccccccaccagc
acccggcagtccatcatctcagagaagaatgacgctacactcccataccactcctcctac
gcatcccagaatgctttagggcgtggcggtgacggggagctgctgtccttcagtctggac
aacaccttcagagagatgaacgagttccaggaagacccatcccttttcctggaggagggg
agctgggagggggaggagtcggagatctgtgaccccaccttgagcctgctcaacatgcat
cactttcaggaggagttcctgcccctgtatgacctccaccactcattcctctggctgacg
ttctcagggcaaagtgaggaggagttactgggccacctggagattgtcagggagggggcc
aagagaacgggcatggcctgggcacaccgacgggcatgcttcctactggggaggctctgc
gccaagaagctcaagtactcccaggcccgtgtgtattacgaggaagcccttggagtctct
gtcgacggtttctctgacctccctctcctcatcgccctgtacaccaacctcacagccgtc
tacctcaaacagaagatggccgacaagctgcccccgaccctggagaaggccagtgctctg
ctcctctgcctccccagccacacattcacctccctggatgagtttgagctgctgaagctt
gtgctgcggaggtctatggtggaaggggacaaacacctggaggcacgggcctgctacctc
actgccagcctcttcctcctccttagaaagatagatgacgccctgcccttcgcggagcgt
ctccagttcctcaccgttaccctgtctgctgagaagggacgccccatcgcccccctggac
ctcaactggcttctgtcccgtctctacaaccgtaaatacatgccctacctggccctggca
tcactcagcctggacactggacaggaccactcactacaggatgccttccacaggatagaa
ctgttcagcaggaactcggtgcgtctgaacccgcgatggaaagagggaacgtctcttctc
ccagcccagatcgtggtgtacctgcagcaggctctggcaattgcggagcggggtgacgac
cttaagacccagagagacctatgtctgggcctggcctgtgtttaccagcaacacggggcc
ctggagaaggccctgccctgtgcccagcaggctgtacagaccgggggaggtatcaacgag
gaggaggggtttgaggcgtcagtactgctgggatggctgttagtcctgacgggacagcct
gagagggcacagaacaccttgcagccactattacagtcactacagggaaccgatagcccg
acccagaggggagtgatccacaacctgctggctctgtgtctgcggcagcagggtggcatc
cccgaggccggcagccacctccactatgccctcaccatctccagggagagtggcaaccag
aggaaccaggccctggccctcgccaacctgggctgcctggcactgggcgtgggggcaccc
acactggcagaacgattcctattcaggtctctgtggttgttcctggagatctgggagagt
cccgttgacgaggagcacgtccagacctacctatggttggggcggagctacaaggacagg
gggaggagccaggacgccaggctgtgttatgagatgggcctcctcatctccctccaggcc
aggaacctacccagtcagatggtggtggctgaagtcctgagtcgtcactatgcagacgtg
ctgctgtatggacagagtatcctctactatgagcactgtgtgtctgtgtccagggacctg
aaggacaagagactagagggagaatatctagagatcctcagcagcctctacctctccctc
aatactgagaaatcatcaaggaagtctctggactacagtaagcagagtctgcgtatctcc
atcgacctggggaagaaggaggaagagtcagagacctggcttcaggtgggacgcatctac
tacctcatccatgaagacgaactggcggacatgtacctacaggcggcagtgaagacagcc
ctgaggatgaacgacccacgcttcgccatgagtatctacgaggaggcaggagacgtcttc
ttcaaaggcaacaggaacagactggcatcactgcccttctacagggacggcagtctccct
tttgctcggagtatccgtgacgtcgactcagagttcagactgctgagtaaactgactgaa
ctactgatgacccaggaagaacatgaagaggctctacagtacgccattctggctgtacag
atcagcaccaaaacaggtgtgtgtgtgaaggagcgcgcagcgtaccaccgtctggctaca
gtgtactacagtctggagcagtatgagatgacagagaactactacctcaagtctctgtct
ctcagccctgctgtactgcagcaccccctggaggctagatactacaccaagctctactgc
aggctgggggacctgacgctgcacaaactaaaggatgcctatgactcgatgggctacttt
cagcttgctcaggctgcagccctggaggaccgtgccaacccacaggcactgtatgtggtc
tacatgaagctggcagagatccatgccaaccacatgccagacccactgctctgccagact
tacagggacagggcacagagcctgaggagggaactctctgggctgggagagacggatggg
aggggagcagtgacggagggg
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