Salvelinus namaycush (lake trout): 120042930
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Entry
120042930 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-1-like
KO
K06759
contactin 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecule (CAM) interaction
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120042930
04517 IgSF CAM signaling
120042930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120042930
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120042930
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Contactins
120042930
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Others
120042930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_VEGFR-1-like_5th
F22D3_4_N
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
Pur_ac_phosph_N
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
120042930
NCBI-ProteinID:
XP_038843622
UniProt:
A0A8U0QJF8
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
VVTSLXRCALSDDATGYGPIFEEEPLDIVYTKESPDRYISMNCRARANPAPTYRWRRDNW
EIKLMELPNEHYSLVGGNLIINNPEEKKHAGTYVCVAKNVYGTVISKEAKVKFGYLEEFP
DEERDPVTVKEGQGAVLLCAPPKRWPTEVTFRWIYNEFPVFLHPDKRRFVSQSTGNLYIS
KVEASDAGNYSCYVFNPQIGKGVYSKFITLISTEETPEKRYKADLVVKFPDTTAMLNYNG
TLECFALGNPAPHIVWRKIGATDLPASAQVSMSGALLHLYNVQYEDSAGYECEAINQKWQ
DWHQAWLYVEAAPEWAVTINNTQKDVGSEHTMSCVANGKPVPYIRWLKDGYSYGKGELKF
SSLTFEDSGMYQCIAENYWGIIYASAELRVIACAPTFELNPVKKYLLGANNGRVVIACKP
RAAPRPRFTWTKGKEVLFNNSRISIMFDGSLEILNATRNDEGVYTCLAENDRGKANSTGT
LTITEATQITVAPEDTQVMVGEEVHLQCQASFDPSLDITFIWSLDFRVIDFYLEWKHYER
IMDREDSGELKIMNAQLRHEGRYTCTAQTVVDNVTASADLKVKGLPAPPGGVRVEEIRDT
SVKLVWNRGADHGSPILGYTIQTRDFYALTEVDWRDASTSPTALDSMSVMADVVDLYPWM
EYEFRVYATNEFGDGEASIPSMKIKTWDAVPVVAPTSVGGYGGKDGELVITWTPVQPQYF
YGKKFGYVVAFKPHDDVDWWYETISDPETRRYVHRDASFRVKSNDFQVREFQVKVKTFNS
KGDGPYSLSTTVYYPRDVPSESPTDVYSRPVSSHEALVWWIPVMDTGTGLQQYIDGYQVK
YWRKYDDTEPGANRIFVPASMNQTRLENMLPDSHYLIEVRAYNGAGVGPPSEHCEMFTKR
APPSVAPQMWRYISYSGKWLYVWWHHISYDWFGNESFPLYYKVMFRKTGYITGPIYMTGW
HFIDFPMPQVGDYELEVRGRYEGGDGPIRKIRLQGKASFLRPTLSLATMLLLALCIVGLG
I
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
gttgtaacatcactgtgacgttgtgccctgtcagatgacgctactggctacggtccaata
tttgaagaggagcctctggatatcgtctacacaaaggagtcacctgacagatatatctcc
atgaactgtagagcacgggccaaccctgcacccacatacagatggaggcgtgataactgg
gagatcaagctgatggagctgcctaatgaacactacagtctggtgggagggaacctcatc
ataaacaaccctgaagagaagaaacatgccgggacctacgtctgtgtcgccaagaacgtg
tacggcaccgtcatcagcaaggaggccaaggtcaagtttggatacctggaggagttccca
gatgaagagagagaccctgtgaccgtgaaggagggccagggggccgtgctgctctgtgct
cctcccaagcgatggccaactgaggtgacgttccgttggatatacaacgagtttccggtc
ttcctccacccggataagcgtcgcttcgtctctcagagcaccgggaatctgtacatctcc
aaggtggaggcgtcagacgcagggaactactcctgctatgtgttcaacccacagattggc
aagggagtctactccaagtttatcactcttatatctacagaagagaccccagagaagagg
tacaaggccgacctcgtggtgaagttccctgacaccacagctatgctcaactacaacggc
acactggagtgcttcgctctgggaaatccggcccctcatatcgtctggaggaagataggt
gctaccgacctgcctgctagcgctcaggtcagcatgtctggagcgctgctccacctctac
aacgtccagtatgaagactcagcagggtacgagtgtgaggccatcaaccagaaatggcag
gactggcatcaggcgtggctctatgtagaggctgctcctgagtgggctgtgaccatcaac
aacacccagaaggacgtagggtcagaacacaccatgtcctgtgtcgctaacgggaagcct
gtcccatacatccgatggctcaaggatggatactcgtatggtaaaggtgagctgaagttc
tccagtctgacgtttgaagactctgggatgtaccagtgtatcgctgagaactactggggt
atcatctacgccagcgctgagctacgtgtcattgcttgtgccccgacgtttgagttgaac
ccagtgaagaagtatcttctaggagctaacaacggccgtgtggtcatagcatgtaaaccc
agagctgcccccagacccaggttcacctggaccaagggaaaagaagtgctcttcaacaac
tcacgtatctccataatgtttgatgggagtctggagatcctgaacgccaccaggaatgat
gagggcgtgtacacctgcttagctgagaatgacagagggaaggccaacagcacggggact
ctcaccatcacagaggcgacacagatcacagtagccccagaggacactcaggtgatggta
ggagaggaggtgcatctgcagtgccaggcctcctttgaccccagtctggacatcaccttc
atctggtctctggatttcagggtcatcgacttctacctagagtggaagcactatgagcgc
atcatggatcgtgaggacagtggagagctgaagataatgaatgcccagttaagacacgag
ggacgctacacctgtacagcccagactgtcgtggacaacgtcaccgcgtcagcagacctc
aaggtcaaaggtcttcctgctcctcccggtggggtgagggttgaggagatcagagacacc
tcggtgaagttggtgtggaaccgaggggccgaccatggcagccccatccttgggtacacc
atccagaccagagacttctacgccctaactgaagtggactggagggacgcatccacctcc
cctacagccctggatagcatgtcagtgatggctgatgttgtggacctgtacccctggatg
gagtatgagtttagggtctatgctactaatgagtttggagatggggaggccagcatccct
tcgatgaagatcaaaacctgggacgcagtgcctgtggtggccccgaccagcgttggaggc
tacgggggtaaagatggagagttggtcatcacatggacacccgtacagccgcagtacttc
tacggtaagaagtttggctacgttgtggccttcaagcctcatgatgatgttgactggtgg
tatgagaccatatcagacccagagacacgacgctacgtccatcgagacgcctctttcagg
gtcaagtcgaacgacttccaggtcagggagttccaagtgaaggtgaagacgtttaactcc
aaaggagatggaccctacagcctgtcgaccactgtctactacccacgagatgtcccctct
gagtctcctacagatgtatactccaggcctgtctcgtcccatgaagctctggtctggtgg
ataccagtcatggacactggtaccggccttcagcagtacatagatggataccaggtgaag
tactggaggaagtatgacgatacagagccgggggccaatcgtatctttgtgcccgcctcc
atgaaccagaccaggctggagaacatgctgccagactcccactacctcatcgaggtcaga
gcctacaacggagccggtgttggccctcccagcgaacactgcgagatgttcaccaagaga
gcacctccaagtgtggctccccaaatgtggcgttacatcagctactctggcaagtggctg
tacgtgtggtggcaccacatctcctacgactggtttggcaatgagtccttcccactatat
tataaggtgatgttcaggaagactggctacatcacagggccgatctacatgacgggctgg
cacttcattgacttccccatgccccaggtaggggactacgagctggaggtcagaggtcgc
tatgagggtggagacggccccatcaggaagatcaggcttcagggtaaggcgtctttcctg
agacccactctcagtctggccaccatgctactgctggccctgtgcatcgtgggattgggg
atatag
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integrated database retrieval system
