Salvelinus namaycush (lake trout): 120043281 Help Entry 120043281         CDS       T07522                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism snh  Salvelinus namaycush (lake trout) Pathway snh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:snh00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     120043281  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120043281 Glycosaminoglycan binding proteins [BR:snh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120043281 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_3 Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  120043281 NCBI-ProteinID:  XP_038843831 UniProt:  A0A8U0QJM2 LinkDB All DBs Position Unknown AA seq 1847 aa AA seqDB search MKNSFSILEANMVDVLRILDLSEDMEGVSLEAGLCTSREGREETDISFKINKKIQLSVPT KQLFPEGGFPVDFSVLATVRARRGAQVFLLSLYDPQGTQQLGLEVGRSPVFLYEDQQGLP PPELYPTFRKINLADGKWHRVAYSVEGQSVTLYLDCEKVESLELQRGLNPEVSTEGVTVF GTRLLDDQVFEGEIQQLLIVADPRAAETYCQDYIPDCHAPLPYDSLSQETEESCYPVFRV PVFRVPVFHVLEFCVAVFCVPVFHVIKFRVPVFRVPVFCVPVFHVIKFRVPVFRVPVFHV LEFCVEVFCVPVFRVLKFRVPVFHVPVFRVPVFRVPVFRVPVFRVLKFRVAVFRVLKFRV PVFHVLEFCVAVFRVPVFRVLKFRVPVFHVLEFCVSVFRVPVFRLPVFLFHVLKFRVSVF RVPVFRVPVFRVLKFHVPVFRVLKVHVPVFRVPVFCVPVFCVPVFRVPVFHGEPGPQGPT GLVGPQGDLGELGPSGRPGLNGADGIPGPPGNILIVPFQAGGIQLTGPVISAQEAQAQAI LQQTKLSMKGPPGPLGLMGRSGPLGNPGPSGLKGVAGEMGPAGSRGIMGQPGTNGKSGKR GRAGTDGNRGAPGETGGKGDRGFDGLPGLPGYKGHRGEIGKPGPHGTLGVSGERGSEGQP GPRGQPGDAGSRGLNGPRGHTGPTGQPGIRGVDGIQGSKGNLGPPGEMGASGQQGNPGLQ GFPGPQGLVGLPGVKGPQGKKGLQGLPGNDGPTGHPGREGTPGEKGLPGPPGVQGPIGYP GSRGVKGADGIRGMKGSKGEKGEDGFPGSKGEMGLKGDGGDNGVPGSRGEDGPEGPKGQA GPLGEAGTVGIAGEKGKLGVPGLPGYPGQKGPKGSDGFPGSIGVLGEKGKRGPGGEAGSA GQRGPNGLRGGRGAKGPTGKTGGKGSSGHDGPNGPTGDRGPQGPQGRNGESGLKGPNGPA GKDGLPGHPGQRGEPGFQGKTGPPGPGGVVGPQGKSGETGSLGDRGHPGSPGVPGEQGLP GTAGKEGAKGDPGAGGTSGKAGPPGLRGFRGSRGAAGGMGPAGLKGGEGPVGAAGAIGAG GERGPPGSAGAIGQPGRAGAVGGPGPMGEKGEPGGAGPIGPSGQDGDQGPLGLPGAAGPA GPPGEDGDKGETGGPGQKGSKGDKGESGPTGPTGGQGPMGQSGVPGVDGESGPRGQQGMY GAKGDEGLRGFKGSKGPIGLQGMPGLPGEKGESGHIGLMGRPGQFGPRGPQGPSGGQGAL GRPGGAGQPGVNGEKGEDGESGDPGPVGVSGGSGDIGDQGEKGDSGLSGAAGPPGARGPP GEDGAKGNSGPIGFPGDSGQPGEAGPNGEDGGPGSKGDAGDTGKSGPPGASGEPGPSGPP GRRGHLGKEGKQGKAGMKGAKGSPGLEGLLGKTGPVGAQGHSGKPGPSGLRGIPGPAGEQ GLNGPPGVTGPPGPMGPPGLPGLRGDPGRKGDKGHGGLIGLIGPPGEFGEKGDRGFPGNQ GLLGPKGDEGLVGLAGPNGPPGLPGLSGRVGQKGSKGNQGPIGSIGDTGPAGPPGPPGLP AVGLQSVPVQERGRRRRQHSSFDGAALEDEEEQEGMEGGEEERMQADQAGQEEEKEMEEV FASLSSMRTEVEGLRTPLGTYQYPARTCKELQLLFPKYTDGEYWIDPNQGCHRDSFKVFC NFTADGETCLYPDIKFQSVKLSSWKGEKPGTWYSQFRKGKQFSYSGSDGSPVHVVQLVFL KLLSASSRQTFTYHCQNSAAWLHTATFSHQHALRFRGSSGEELTHQDTHYITALHDGCQS GSGQERTVLEFDAPQPDSLPLIDVSVSDFGHNNQKFGFQLGPVCFNG NT seq 5544 nt NT seq  +upstreamnt  +downstreamnt atgaagaacagcttctccatcctggaggccaatatggtggacgtgctgaggatcctggac ctatcagaggacatggagggtgtgtctctggaggcggggctctgcaccagtagagaggga agagaagagacagacatctccttcaagatcaacaagaagatccaactcagtgtccctaca aaacagctgttcccagaagggggattcccagtggacttctctgtcctggctacggtgcgt gcccggcggggtgcccaggtgttcttgctgtccctgtacgaccctcagggtacccagcag ctggggttagaggtcggaaggtcccctgtcttcctgtatgaagaccagcaaggcctgcct cctcctgaactataccctaccttcaggaagatcaacctggctgacggcaaatggcacagg gtagcgtacagtgtggagggtcagtcagtgactctgtatctggactgtgagaaggtggag agtctggagctccagagaggtcttaacccagaggtcagcactgaaggggtcactgtgttc gggacacggctactggatgaccaggtctttgagggagaaatccaacagttgttgatcgta gccgaccccagagctgcagagacctactgtcaagactacattcccgactgccacgcccct ttaccctacgacagcctatcacaagagactgaggagagttgttatccagtgttccgtgtg ccagtgttccgtgtgccagtgttccatgtgctagagttctgtgtggcagtgttctgtgtg ccagtgttccatgtgataaagttccgtgtgccagtgttccgtgtgccagtgttctgtgtg ccagtgttccatgtgataaagttccgtgtgccagtgttccgtgtgccagtgttccatgtg ctagagttctgtgttgaagtgttctgtgtgccagtgttccgtgtgctaaagttccgtgtg ccagtgttccatgtgccagtgttccgtgtgccagtgttccgtgtgccagtgttccgtgtg ccagtgttccgtgtgctaaagttccgtgtggcagtgttccgtgtgctaaagttccgtgtg ccagtgttccatgtgctagagttctgtgtagcagtgttccgtgtgccagtgttccgtgtg ctaaagttccgtgtgccagtgttccatgtgctagagttctgtgtgtcagtgttccgtgtg ccagtgttccgtttgccagtgttcctgttccatgtgctaaagttccgtgtgtcagtgttc cgtgtgccagtgttccgtgtgccagtgtttcgcgtgctaaagttccatgtgccagtgttc cgtgtgctaaaggtccatgtgccagtgttccgtgtgccagtgttctgtgtgccagtgttc tgtgtgccagtgttccgtgtgccagtgttccatggagaaccaggaccccaggggcccacg ggactggtaggacctcaaggagacctaggagaactgggtccttcaggccggccgggtctc aacggggctgatgggataccaggtcctccagggaacatcctcattgttccgttccaggca ggtggaatccaactaacaggacctgtgatatcagcccaggaggctcaagcccaggccatc ctacaacagaccaagttgtctatgaagggaccacctggaccattaggccttatgggacgt tcaggaccgctgggtaacccgggtccttcggggctgaagggagtggccggggagatggga ccagcgggttctagaggtattatgggccaaccagggacgaatggaaagtcagggaagagg ggtcgagctgggacggatgggaacaggggtgctccgggtgagaccggtggaaagggtgac aggggttttgatggcttgccaggtcttccaggatacaagggacacaggggggagatagga aaaccaggcccccacggtactcttggggtgtcaggagagaggggttcagaaggacaacca ggaccaagaggacagccaggtgatgctggttccagagggttgaacggacccagaggtcac actggccctacaggtcagcctggcatccgaggtgtggatggaatccaaggttctaaggga aacttgggacctcctggggagatgggagcatccgggcagcaaggaaaccctgggttgcag ggatttcctggtcctcagggactggtcggcttgccaggagttaaggggccccaagggaag aaagggttgcagggactacctgggaatgatggacctaccggtcacccagggagagagggg actccaggagagaagggactaccgggcccaccaggagtccaggggcctataggatatcca ggatcaagaggagtgaagggagcggacggaattagaggaatgaagggaagcaaaggggag aagggtgaggatgggttccccggctctaagggagagatggggctgaaaggtgacgggggt gataatggggtcccagggtccaggggagaggatggtcctgaaggacctaaaggacaggct ggaccgctgggggaggctggaaccgtgggtatcgctggagaaaagggtaaactgggagtt ccagggttgccggggtatccgggacaaaaaggacctaagggttcggatggtttccctgga tctatcggagtgttgggagagaaggggaagaggggtcccgggggggaagcaggcagtgca ggacaaaggggtcctaacgggctgcgtgggggccggggtgccaagggaccaacagggaag acagggggaaagggctcctctggacacgatggacccaacggaccaactggagacaggggg cctcaagggccacaaggacggaacggggaatcaggactcaagggacccaacggtccagcg gggaaagatggacttccgggtcacccaggtcagagaggagagccgggtttccaaggaaag acgggacccccaggtccaggaggtgttgtggggccacagggtaaatcaggtgagaccggg tcattgggagacagaggtcaccccgggtcacctggtgtaccgggagagcagggcctacct ggcaccgctgggaaggagggagctaagggcgacccgggtgcaggagggacttctgggaaa gctggtcctccaggactcaggggcttcagaggcagcagaggggccgccgggggcatgggt cctgctggtctgaaaggaggtgaaggaccagtcggagcagcaggagctataggggccggt ggtgagaggggtcctccagggtcggccggtgctattggtcagcctgggagggcaggggct gtgggtggacctggaccaatgggagagaagggggaaccgggaggggcgggccccattgga ccatcaggacaggatggagaccagggacctctaggactacctggagctgcaggccctgca ggccccccaggagaggatggggataagggagagactggaggaccaggccagaagggcagc aaaggagacaaaggagaatcaggccccacaggaccaaccggtggccagggcccgatgggg cagtcaggagttcctggtgtggatggggagtcaggtcccaggggtcagcagggaatgtac ggggccaagggtgacgagggtctccggggcttcaagggctccaaaggacccattggacta caggggatgcctggtcttccaggagagaagggggagagcggacacatcggcttgatgggt cgtccaggtcagtttggtcccagagggccacaagggcctagtgggggacagggtgctctg ggcagaccaggtggggctggacagccaggggtaaatggagagaagggggaggatggagaa tcgggagacccaggacccgttggtgtatcaggaggcagcggggatataggtgaccagggg gagaagggggactcgggtctctctggagcagcagggcccccaggagccagaggcccccca ggagaggacggggccaagggaaactctggtccgattggtttcccaggagactcaggacag ccaggggaggcaggacctaacggggaggatggaggtcctggatccaagggagatgctgga gatacagggaaatcaggtccaccaggagcatcaggggaacccggcccctcggggccaccg ggacgcaggggtcacctgggtaaagaagggaagcaggggaaagcagggatgaaaggagcg aagggctctccggggttggagggtctcctggggaagacaggaccggtgggagcccaggga cattctggtaaaccaggtcctagtggtctcagagggatccctggcccagcgggggaacaa ggtttaaatggaccaccaggtgtaacaggaccaccaggacccatgggtcctccaggacta ccggggttgaggggagatccaggcaggaagggagacaagggtcatggaggtctgattggg ctaataggccctccaggagagtttggagagaaaggagacagaggatttccagggaaccag ggtctactgggacccaaaggagacgagggtctggttggtctagcaggtcctaatggtcct ccaggtctacctggtctctctggtagagtaggacagaagggttctaaagggaaccagggt cccatcggttctatcggagatacaggtcctgctggccctcctggacctcctggtcttcct gcggtgggtcttcagtctgtcccggtgcaggagagaggaaggaggaggaggcagcactct tcctttgacggggccgctctggaagacgaggaagagcaagaggggatggaggggggagag gaggagaggatgcaggcagaccaggcagggcaggaggaggagaaagaaatggaggaggtg tttgcttctctctcgtctatgaggacggaggtagagggtctgaggaccccactggggacc taccagtatccagccagaacctgcaaggagctacagctgttgttcccaaagtacactgat ggtgagtactggatagaccctaaccagggttgccatagagactccttcaaggtgttctgt aacttcacggccgatggagagacatgtctgtaccctgacattaagttccagtcggtgaag ctgagttcctggaaaggagagaaacctggtacctggtacagccagttcaggaaaggaaag cagttctcctattcaggttcagatggcagtccggtccatgtagtccagttggtgttcctt aagctgttgagtgcttcatccagacagacgttcacctaccactgtcagaactcagccgcc tggctccataccgccaccttcagccaccagcacgcgctgcgcttcagagggagcagcgga gaggagctcacgcaccaagacacacactacatcacagcactgcacgacggctgccagtct ggttcaggtcaggagaggacggtgttagagtttgatgcccctcagccagactctctcccc ctcatcgacgtctctgtctccgacttcggacacaacaaccagaagtttggcttccagcta ggtcccgtctgcttcaacggttaa

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