Salvelinus namaycush (lake trout): 120043743
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Entry
120043743 CDS
T07522
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120043743
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Other
120043743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_6
Interfer-bind
Sp38
ChitinaseA_N
DUF6034
DUF1461
Motif
Other DBs
NCBI-GeneID:
120043743
NCBI-ProteinID:
XP_038844235
UniProt:
A0A8U0U9B5
LinkDB
All DBs
Position
Sna3:25071493..25168442
Genome browser
AA seq
2043 aa
AA seq
DB search
MESQLNGSDTRLHSEDVGSTRLYFVNASLQRLTYSSSVGVSLPCPAGGTPTAILRWYLAT
GDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNDYFCTAENQAGKIRSPNIRVKAVF
REPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWERDTVSIVPGNRFFLTSFGALY
ISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESSPSILDSFQAGEVRAGQSV
ELPCMAAGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSFGSK
EVSGALYVIDPLRVTLSPKSLKTGISSTLFFTCAVEGSPEYTVAWYRNTEPIVPDQHISI
QGSHNDTLQITAAQKSHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVAPGE
PFSLMCASKGAPPPSITWTLDDEPVVRDSAYKTSQYTLSDGLTVSHVNVSNPAIRDGGVY
RCAARNSAGSAEYQARINVRGSPRIREMRDITAVAGRNTFITCRVIGYPYYSIKWFKDGM
LLPDNHRQVVYENGTLRLSDVQKGMDEGTYLCSVLIQPQTSIDQTVHVTVKVPPLIQPFD
IPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVGIETKEFMSSLQISKVTL
KHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDGIYGKAGVLNCSVEGYPPPKV
MWKHAKGIGNPQQYHPVPLTGRIQIMFNGSLLIRHVLEDDRGYYLCQASNGVGSDISKSM
VLTVKIPAMITSHPNTTMAIKGQMKELNCTARGEQPIIIRWERGDTVIDAERNPRYSITI
NKKGDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREVKDR
SMNLRWIQRFDGNSIITSYDIEYKNKSDTWDHKYTTRNISPTNNQANIVELHPACVYSIR
MYSFNRIGRSQPSKELTISTEEAQPDGPPMEVILQPMTSQSIRVTWRAPRKELQNGVIRG
YQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSTEI
NATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGEWGE
MQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDLPGPPAGIKAVP
SSPNSVVVSWLPPHKPNGVIRKYTIYCSSPGTGQPAPSEYEANPEMLFYRITHLTRGKQY
LIWASAVTTAGRGNISEKVTVEPAGKAPAKILSFGGTVTTPWVKEVRLPCSSVGEPTPTI
KWTKDSEDSTIPVTVDGQRQILSNGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQ
VPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSSERSFR
LDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKEQPLLTHINSTHAGLNLQ
GWTSGGCPITALLLDFRPKGTWAWQSLKANATAQLFLSELREATWYELKMKACNSAGCGN
QSSQFATTDYDGSTIPPINSAQEDRDDVKKLFSIGSPVILVTLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSMDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKAV
APVTDTEFSQSVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKCVKSAHSSR
NRYSSQWTLSRPGQSQSTASARTLTSDWRTMGSHGITATESDSYSASLSQDTDKGRNSMV
STESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQMTTGTNDPADSMTSLS
TPSETGLCRFTASPPKPQDYDRGRPTNVAVPIPHRANKSEFCNLPLYMKTDPFFRKQAEL
HDPCPAVPPREASIRSLAQRAYHTQGRHMTLDPSKQQALTLGHSGLGSLGVSSGTATLPQ
RTLTMPCSNPAATASTSSTSSNPTGSSTKMGGSRDSLLENSSSALGRLQKQGVGAYSKSY
TLV
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacaactcaacggctcagacacgagactacacagtgaggatgtgggctctacc
aggctgtactttgtgaacgcatccctgcagaggctgacctactccagctcggtgggggtg
tctctgccctgcccggcgggcggcacccccaccgccatcctgcgctggtacctggccacc
ggcgatgacatctacgacgtgccccacatccgccacgtccatgccaacggcaccctccaa
ctctaccccttctcaccctccgccttcaactcctacatccacgacaacgactacttctgc
accgcagagaaccaggctggcaagatccgaagccccaatatcagagtcaaagctgtgttc
agggagccgtacacggtgcgtgttgcagaccaacgctccatgcggggcaacgtggccgtg
ttcaagtgcctcattcccaccgccgtgcaggagtacgtcagcgtggtgtcctgggagaga
gacactgtctccatcgtcccaggtaacaggttcttcctgacgtcctttggtgctctgtac
atctcagatgtccagaaggaggatgccctctctacctaccgctgcatcaccaagcacaaa
tacagtggagagacacgtcagagcaatggagccaggctgtctgtcatggaccccaccgaa
tcgtctccctctatcctggacagtttccaggcgggggaagtgcgggctggtcagagtgtg
gagctcccctgcatggcagcagggtaccccagccccacggtgcgctggctaaaggacggg
cgcccgctgccctctgatgcacgctggacgcggcgcctcacgggtctgaccatcagtgac
ctcaggcaggaggacagcggtagctacgcctgtgaggtcaccaacagcttcggctcgaag
gaggtgtccggagcactctatgtcatagaccccctgcgagtgaccctctcccctaagagt
ctgaagacgggcatcagcagtaccctgttctttacctgtgctgtggagggttcgccagag
tacacagtggcctggtacaggaacacagaacctatagtcccagaccagcacatctctata
cagggctcccacaacgacaccctgcagatcacagccgctcagaagagccactctggggcc
taccagtgctttgcctcccgcaagggccacaccgcccaggacttctctatcatactgctg
gaggacggcactcctcgtatcgtgtcttccttcagtgagcgcgtggtcgcccccggtgag
cccttctccctgatgtgtgcctccaagggagccccacccccctccatcacctggacgctg
gacgacgagcctgtggtgcgagactccgcctacaagaccagccagtataccctatcagac
ggcctgaccgtgtcacatgtcaacgtcagcaacccggccatccgtgacgggggagtgtat
cgctgcgccgcacgcaactcggccggtagcgccgagtaccaagcgcgcataaacgtaaga
ggttctcctaggatcagggagatgcgtgacatcacggctgtggcaggaaggaacaccttt
ataacctgtcgtgtgattggttacccctactactctatcaagtggtttaaggacggcatg
ctgctgcctgacaaccatcgccaggtggtgtatgagaatggaaccctgaggctgagtgat
gtgcagaagggcatggacgagggtacctacctgtgtagtgtgctcatccagccacagacc
tccatcgaccagactgtccacgtcactgtcaaagtgccacccctgatccagccctttgat
atcccctccacgtcggtgggaaagctgatgtacattgcctgcgtggtgtcgtcaggtgac
atgcccatccgcatcacctggcacaaagacgggcaactcatcgtgcctggttccgcctct
ggtgttggcatagagaccaaagaattcatgagctccttgcagatctccaaggtgacgctg
aagcacaatggcaactacacctgcattgctagcaacgccgcggcaaccgtcagctgggag
agacagctgatcgtcaccgttccccctcgcttcgtggtccagcccaacaaccaggatggg
atctatgggaaggcaggagtactaaactgttctgtggagggatacccccctcccaaagtc
atgtggaaacacgccaaaggtatagggaacccccagcagtaccaccctgtgcctctgact
ggtcggatccagatcatgttcaacggctccctgctgattcggcacgtcctagaggacgac
cggggatactacctctgtcaggcctccaatggagtgggctctgacatcagcaagagcatg
gtcctcaccgtcaagattccagccatgatcacgtcgcaccccaacaccaccatggccatc
aagggccagatgaaggagctgaactgcacagcgcggggggagcagcccatcatcatccga
tgggagaggggcgacactgtcatcgatgctgagaggaacccccgctactccatcaccatc
aacaagaagggggacgaggtcatctccacactcaagctaaagccagcggagcgcggggac
tcagtcttcttctcctgccatgccatcaactcatacggagaggggcgaggactcatccag
cttaccgtgcaagagcctcctgaccctcctgagttggaggtgagagaggtgaaggaccgc
agtatgaacctgcgctggatccagaggttcgacggcaacagcatcatcaccagctacgac
atcgagtataagaacaagtctgatacttgggatcacaagtacaccaccaggaacatctcc
cccactaacaaccaggctaacattgtggagctgcaccctgcctgtgtctacagcatccgc
atgtactccttcaacaggatcggacgcagccagcctagcaaggagctcaccatcagcact
gaggaagcacaacctgatgggccccctatggaagtgatcctccaaccaatgacgtctcag
agcatacgggtcacatggagggcccccagaaaggagcttcagaacggggtgatccggggg
taccagatcggttaccgtgagaacgggccgggcagtaacggccaatacagcattgtggag
atgaaggccacaggggacagtgaggtgtacaccctggacaacctgaagaagtttgcccag
tatggagtggtggtccaggccttcaacagggctggcactggcccctctagcactgagatc
aacgctaccacactggaggatgtgcccagccagccgccccagaacgtgagggctatctcg
gtgacgtcagacgaagcggtgatcacgtgggcggagcccccgcgtctgacgctgcatggc
gtgctgaagggctaccgtgtggtgttctggtccctcttccccgacggagaatggggagag
atgcaaaacatcactacaactcgtgagcaggtggagctgagagggttggagaagtttact
aactacagtgtccaggtgctggcctacacacaggctggggacggggtcaggagcaatgtc
ctgtacatccaaacccgcgaggacctcccaggtcctccagctggtatcaaagccgtgccc
tcatctcccaacagtgtggtcgtgtcctggctacccccccataaacccaatggtgtcatc
cgcaagtacaccatctactgctccagcccaggcaccggacagccggctcccagtgagtat
gaggccaacccagagatgttgttctacaggatcacccatctgacccgcggtaaacagtac
ctcatctgggcctccgctgtgacaactgctggccgcggcaacatcagcgaaaaggtcacc
gtggagcctgctgggaaagccccagctaagatcctgtcgttcgggggcacagtgactact
ccctgggtgaaggaggtccgtctgccctgcagctcagtgggagaacccacccccaccatc
aaatggaccaaagacagtgaggactcgactatccctgtgactgtggacgggcagcgtcag
atcctgtccaacggtacactggtgttacgttccgtcaaagctgaggattctgggtactac
acgtgcacggctaccaacaccctgggctttgacaccatcatagtcaacctgctggtgcaa
gttcctccagaccagccccgtctgaccgtctccaccacctccacctcttccatcacgctg
gcctggatccctggggacaacggaggcagctccatcagaggtttcgtcctgcagtactca
gtggacaacacagaggagtggagggatgtgttcattagttccagtgagcgttccttcagg
ctggacaacctgcgctgtgggacctggtacaaggtcaaactggcagccaagaacagtgtg
ggctcaggacgcatctctgagatcatcgaggctaagacccacggacgagagcccgtgttc
aacaaggagcagcccctgctcacccacatcaactccacccacgcggggctcaacctgcag
ggctggaccagcggaggctgccccatcaccgctctgctgctggacttccgccccaagggc
acgtgggcctggcagagcctgaaggccaacgccacggcccagctcttcctcagcgagctg
cgggaggccacctggtacgagctgaagatgaaggcctgtaatagcgccggctgtgggaac
caaagctcccagtttgccaccacagactatgacggcagtaccatccctcctataaactcg
gcccaggaggacagggatgatgtgaagaagctgttctccatcggctctcctgtcatcctg
gtcaccctgggcgtcgccctgctcttcatcatccgcaagaaacgcaaggagaagagactc
aaacgactcagagatgctaagagccttgcagagatgcttatcagtaagaacaaccgcagc
atggacaccccagtgaagggtcctccccagggccctcggctccacatcgacatccctcgt
gtccagctgctcatcgaggacaaggagggcatcaagcagataggtgaggacaaggcagtg
gccccagtgacggacacagagttcagccaatcagtgaatccacagagcttctgcacgggt
gtgtctctgcaccatcctgccctcatccagaacacagggcccttgattgacatgtcagac
atccgccctggaaccaacccagtgtcgaggaagtgtgtgaagtcagcccacagctccaga
aaccgctactccagccagtggaccctgagcaggccgggccagagccaatcaacagcctcc
gcaaggactctgacctctgactggcgcaccatgggctcccacggcatcaccgctaccgag
agtgacagctacagcgccagcctgtcccaggatactgacaagggtcgtaacagcatggtg
tccacagagagtgcgtcgtctacgtatgaggagctggcgcgggcctacgaacacgccaaa
ctggaggagcacctgcagcatgccaagttcaccatcacagagtgcttcatctccgacagc
tcctctgaccagatgaccacaggcaccaacgacccggccgacagcatgacatcactcagc
acgccatccgagacaggcctgtgtcgcttcaccgcctcgccacccaaaccccaggactac
gaccgcggcagacctaccaacgtggccgtgcccatcccccaccgtgccaacaagagtgaa
ttctgcaacctcccgctctacatgaagacggatcctttcttccggaagcaggcagaactg
catgacccatgccctgcggtcccgcccagggaggcctccatccgcagcctggcacagcgg
gcgtaccacacccagggacgtcatatgactctggacccgtccaagcaacaggccctgacg
ctaggccactctgggttgggcagtctgggcgtgagctcaggcactgccaccctgccccag
aggactctcaccatgccctgctccaaccctgcagccacagcctccacctccagtaccagc
agcaaccccactggctccagcacaaagatggggggctccagagactcactgctagagaat
agctcctcagcgctgggcagactgcagaagcaaggggttggggcctactctaagtcttac
acgctggtgtag
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