Salvelinus namaycush (lake trout): 120043876
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Entry
120043876 CDS
T07522
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120043876 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120043876 (rsf1b.1)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
120043876 (rsf1b.1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
120043876
NCBI-ProteinID:
XP_038844409
UniProt:
A0A8U0U9W8
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Position
Sna3:42192562..42236581
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AA seq
2034 aa
AA seq
DB search
MAASAPSVGFSSDLCPSYAVICSFLERYGALLDLPELTFPQLERYLQDTSSVPKLLVDLH
VKLLRKIGKSVSADRWEKYIVKVCHEFNSTWAWELENKGYKDMSVECKTGILKHLCECQF
DDNVKFKTAINEEDPDKMRLHPIGKDKDGLMYWFQLDQDNNVRVYVEEQDDLDGSSWKCI
VRDRNSLAEILAQLKTQIDPALLTKKEGEEEDGNKKTGGEGEIKKTEDTSGDEEDKPSKD
TVSLVSPKTENTEKKSPKEESKLDESDAKSPSNGLKDNQVESESTRQSEKPMVDDKATIN
TQAIKEEPMEVSESKESTATSATEPLAEKHCVTPQTEQTEEAKRKTAEELQRVMKNDQQA
KIPLKKREMKLSEDFDNSSGGGSRIIVRNPSVAPVKEAPTVEETSKEVSVALVGTMEIKS
DQVNVDAQPVTEKSVNKGMRESPKEMGIQRESADSKEQQTKVVAREECEAAEASEKEKTN
LSLDMDKKEGEMASNAEEPMEVAMADETNLQKTVPAPKAEKESTEALKKSSLKEAKSSSP
LTKPLTSSKDATSTPEKSSDLKEEQKVKVSKWDVKVRRTEHKTSTSIETDKNPLSSKSQK
PDETKGTDSSIAFQEVNLAAFKETVVPKDSCPLSVVKEMEKTSIIKATEKLLNPKNPETS
VITKQTERPDPITDKPESSKRPESPAVIKNTENPSNKESAEKCDGSNDIKTSSVIKKTEI
SEKSKDAKNLASSKETNTSSFLKKADKPVPNKKAEKLESTNETNKSLVIKMTVKPEASKH
TEKCDTPKDMSALTKEKPAVSAVSTHTNVAPEVKKKNVLEKDSKKTAICKDETRAVAAVT
EKQSVPKDVEMADIFEKSNQSQLEGPKKVAKLGIPKDTLKSTMPKYAEKSAKLATPKDGE
KLATPKDGEKLATPKDGEKLATPTDGEKLATPTDGEKLATPTDGEKLATPTDGEKLATPT
DGEKLATPTDGEKLATPTDGEKLATPTDGEKLATPTDGEKLATPTDGEKLATPTDGEKLA
TPTDGEKLATPKDTEKLPKSATSENAGKSATPTDAEKSATPTDAEKSATPTDAENSAKSA
TPIPKDAEILATPEEAEKSVNTKDTEKSASLKNTETASKKIVKSSICEGQKPDASKENEK
LADIKPAAAEGEKHVAFEDSKQLPSLKESVPVGRKQEEPMEISSEKSTDVIIRGHADKGW
TKKSVKSGENSESEPQKTQTSDSNRIDCNAPSEKQATSKKASSLTEAEGETDKSQDKVIK
EDATTQGCPKENEKEDDQAKKDDKMEDDGAEKDNSTAAEKTGEAKASKGSENKEDEKKDA
GTTSEIQEEGIRLKIRGITHRRRAALQRTERDSGSDTGETGRSLRRSPRICRPTAKGVEF
QDRRLEKKETTPPEEKADEEEETVQRKPREKVDQDGQSKSKGRRRRKTRWSNTRTRRRKK
NGSGDDNESESSEEESEEDDSDESFKVEKGKRRWKNRNRERHSDDSDTSSDDDLPPNEDP
CKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCDKLEEQLAN
LDAALKKRDRAERRKERLVYVGISVENIITPSLEVEEEKEEEKEEVKKQKKEKSKSWGRR
STRAKKSISYRFDEFDEAIEEAIEEDIREADGGGAGRGKDMANITGHSRGKDMSTILAAG
EVGEGKENGRPPRPNAGQRRKKRRRLNDLDSDSTVEEEESEDEFRLSDSTEEEEFVASDK
SDAESEAAVDSNDDSDFGSTRRRTARTRRPAKCQRSTRPRRRRRARGYSDDEEEETSDED
EDEMMSEGSSEFSDSDLDCSQRRSRRSHTKKQVNYCESSGDSDGSKAGTNRDKVKPRRRL
ASSDSEASSSRGSDVGKRERTRLKRRADSSEEESQQRRRRLSLKRRRASEEDDDDDSDES
SEGERPVRKRVNRIDSDDSDEEEKEETKEEEEGGVLGKGASPLDYNLVELHPPTNGQSPI
KALEGLAHIGPQKPGATAVTIAPNGLELAPQDDDEDDLLGVTDLVDFVCNSDVL
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggctccatcggtgggtttctcctccgatttgtgcccaagctacgccgtg
atatgctcttttctagagcgttatggagctttgctggatctaccggagctcacattcccg
cagttggagagatatctccaagacacatcttcagttccaaagctcttggtggaccttcat
gtgaagttgctgaggaagattggcaagtcggtgtccgcagacagatgggagaagtacatt
gtgaaggtgtgccatgagttcaacagtacctgggcatgggaacttgaaaataaaggatac
aaggacatgtctgtggagtgcaagactggaatcctcaaacacttatgtgagtgccagttt
gatgacaatgtcaagttcaagactgcaattaatgaggaggatcccgataagatgcggctc
catcccattggcaaggacaaggatggcctaatgtactggttccaacttgaccaggataac
aatgtgagggtctatgtggaggagcaggacgacctggacgggtcctcctggaagtgcatt
gtcagagacagaaacagcttggctgagatcctggcacagctgaagactcaaatcgaccca
gcactgttgacaaagaaagaaggagaggaggaagatgggaacaagaagactgggggagaa
ggggaaattaaaaagacagaggatacctcaggggatgaagaggacaaaccctccaaggat
acagtttctttagtctcccctaaaacagagaatacagaaaaaaaatccccaaaagaggaa
tcaaagctggacgaatcagatgccaaatccccatcgaatggcctcaaagacaaccaagtc
gagtcagagtcaacaagacaatccgagaagccaatggtggatgacaaggccaccattaac
acccaggccatcaaagaagagccgatggaggtgtcagaatccaaggagagtacagccaca
agcgctacagagcctcttgcggagaaacattgtgtgacgccacagacagaacagactgag
gaagccaagaggaagactgcagaggaactccaaagggtgatgaagaatgaccagcaggcc
aaaatccccttgaaaaagagagagatgaaacttagtgaagattttgataatagtagtggt
ggtggcagtagaatcattgtgcgtaacccatctgttgctcctgtcaaagaagctcctaca
gttgaggagacaagtaaagaggtctctgttgccctggtggggactatggagattaaaagc
gatcaagtgaatgttgatgctcagcctgtcacagaaaaaagtgtcaataaggggatgaga
gaatctcctaaagagatgggaatacagagagaatctgctgatagcaaagaacagcaaaca
aaagttgttgctagggaagaatgtgaagcagcagaagctagtgaaaaagagaaaacaaat
ctgtccctggacatggacaaaaaggaaggggagatggcaagcaatgctgaggagcccatg
gaggtggccatggctgatgaaactaacctacagaaaactgttccagccccaaaagcagag
aaggaaagcactgaagcactgaaaaaatcatccctaaaagaggctaaatcttcatctcct
ctgacaaagccattgacttcatctaaggatgcaacaagcacaccggaaaagtcctctgat
cttaaagaggaacaaaaagtcaaggtatccaagtgggatgtgaaagtgcgtcgtacagaa
cacaagacatccacatcaatagaaacagataaaaaccctttatctagtaagtcacagaaa
ccagatgaaactaaaggaacagattcatccattgcatttcaagaggtaaatttggctgcc
tttaaggaaacagttgtccctaaagacagttgtcccctttctgtagtgaaagagatggaa
aaaacatccattataaaagccacagaaaagttgttgaaccctaaaaacccagaaacatca
gtcatcactaaacaaaccgagagacctgatcccattacagataaaccagaaagctcgaaa
cgccctgagtcgccagcagtcataaaaaatacagagaatccatctaacaaagagagtgca
gagaaatgtgatggttctaacgatattaaaacatcttctgtcattaaaaagacagagatt
tcagaaaagagtaaagatgccaagaacctggccagctctaaagagaccaatacgtcctca
ttccttaaaaaggcagacaaaccagttcccaataaaaaagcagagaaactggagagcact
aatgagactaataaatcgttggtcattaaaatgacagtgaaaccagaggcatctaaacat
acagaaaaatgtgatacccctaaagacatgtcagctctcaccaaggagaaacctgctgtc
agtgctgtaagcacacatacaaatgttgcccctgaggtgaagaaaaaaaacgtcctggag
aaagactctaagaaaacagccatctgtaaagatgagacaagagctgttgcagcagtgact
gagaaacaatctgtccctaaagacgtggagatggcagacatctttgagaaatcaaaccaa
tcacaactggaaggaccgaaaaaggtagcgaaattgggtatccctaaagacacgttgaaa
tcgacaatgcctaaatacgcagagaaatctgctaaattggctacgcctaaagacggcgag
aaattggctacgcctaaagacggcgagaaattggctacgcctaaagacggcgagaaattg
gctacgcctacagacggcgagaaattggctacgcctacagacggcgagaaattggctacg
cctacagacggcgagaaattggctacgcctacagacggcgagaaattggctacgcctaca
gacggcgagaaattggctacgcctacagacggcgagaaattggctacgcctacagacggc
gagaaattggctacgcctacagacggcgagaaattggctacgcctacagacggcgagaaa
ttggctacgcctacagacggcgagaaattggctacgcctacagacggcgagaaattggct
acgcctacagacggcgagaaattggctacgcctaaagatacagaaaaattgcctaaatcg
gctacgtctgaaaatgctgggaaatcggctacccctacagacgctgagaaatcggctacc
cctacagacgctgagaaatcggctacccctacagacgctgagaattccgctaaatcggct
acgcctatccctaaagacgcggagatattggctactcctgaagaagcagagaaatcggtt
aacactaaagacactgagaaatcggctagccttaaaaacacagagactgcttctaaaaag
attgtgaaatcttcaatctgtgaaggacagaaaccagatgcctctaaagaaaatgagaaa
ctggcagacataaagccagctgcagcagaaggagagaaacatgtcgcctttgaggattcc
aagcaattaccttctctcaaagagtctgtcccagtggggaggaaacaggaagagcctatg
gaaataagttcggaaaagtcaacagatgtaattattaggggacatgccgataaaggctgg
acaaagaagtctgttaaaagtggagagaattctgagagcgagcctcagaagactcaaacc
tcagactcaaaccgcatagactgtaatgcaccatcagaaaaacaggctaccagcaagaag
gcatcatctctcactgaggctgaaggtgagacagacaaaagccaggacaaagtaatcaag
gaagatgccacaacacagggatgccctaaagagaatgagaaggaagatgatcaggctaag
aaagatgacaaaatggaggatgatggtgctgagaaagataactcaactgcagcagagaaa
acgggtgaggcaaaagcaagtaaagggtctgagaataaagaggatgaaaaaaaggatgca
ggaacaacatcagagattcaagaggaggggattcgcctgaaaatacgggggattactcat
cgaaggagagctgcgctccagagaacggagagggactctgggtccgatactggtgagact
gggagatccctgaggaggtcacccaggatttgcaggccaaccgctaagggggtggagttc
caggacaggaggctggagaaaaaagagaccacgccccctgaggagaaggcagacgaggag
gaggaaactgttcagaggaaaccaagagaaaaggttgatcaagatggacagtccaaatct
aaggggcgacggaggagaaagacccggtggtccaacactcgaacacgaaggcgcaaaaag
aatggttctggtgatgacaatgaaagcgagtcaagcgaagaggagagtgaggaggacgac
agtgatgagagctttaaggtggagaagggcaagaggaggtggaagaaccggaacagagaa
aggcacagcgacgactctgacacctcctcggatgatgacctccctcctaacgaagatccc
tgcaaacactgcggcctccccaaccatcccgagctgatcttgctatgtgactcgtgtgac
agtggctaccacacggcctgcctcagaccccctctcatgatcatcccagatggggagtgg
ttctgtccaccttgccaacataagctactatgtgacaagcttgaggagcagcttgctaat
ctcgatgctgccctgaaaaagagggatcgcgctgagcgaagaaaagaacgtttggtctat
gttggaataagtgtcgaaaacatcatcactccctctttggaggtagaggaagaaaaggag
gaagaaaaggaagaagtgaagaaacagaagaaagagaaaagcaagagctggggtcgaagg
tcgacaagggcaaagaaaagcataagttataggtttgatgaatttgatgaggctatcgag
gaggcaattgaagaagacatcagagaggctgatggtggaggagctggtcggggcaaggac
atggccaacatcacaggccatagcagagggaaggacatgtccaccatcctggcagcagga
gaggttggtgagggcaaggagaatggacgcccgccacggccaaacgccggccagcgcagg
aagaagcgccggcgtctcaacgacctggacagcgacagcactgtggaggaggaggaaagc
gaggacgagttccgtctcagtgacagtacggaggaagaggagtttgtggcgtcagacaag
agcgacgcagagagcgaagcggcagtcgactctaacgacgacagtgacttcggcagtacg
cgacgcagaactgccaggacaaggaggccggccaaatgtcaaaggagcactcggccgcga
aggcgccgcagagcgagagggtactcagacgatgaagaggaggagacgagtgatgaagat
gaggacgaaatgatgtcagagggctccagcgagttcagtgacagcgacctggactgtagc
caacgccgatcccgccgtagtcatacaaagaagcaggtcaactactgcgagtcgtccggc
gactccgacggctcaaaggccggcaccaaccgggacaaagtcaaaccgcggaggcgcctc
gccagctccgacagcgaagcaagctcctccagaggctcggacgtgggcaagagggagagg
actaggttgaagaggagggctgactcgtctgaggaagagtcccagcagcgccgcagacgc
ctctcgctgaaacggaggcgagcctccgaggaggatgatgatgatgattccgacgaatca
tcggagggagagcgtccggtccgcaagcgtgtgaaccgcattgactcggacgactctgac
gaggaggagaaggaagaaacaaaggaagaggaggaagggggggtgctggggaagggagcc
agtccgttggactacaacctggtggagctgcacccccctactaacggacagagtcccatc
aaggccctggagggcctggctcacattgggccccaaaaacctggagccacagccgtcacc
atagcacccaacggactggagttggcgccacaggacgatgatgaggacgacctgctgggg
gtcacagacctagtggactttgtctgcaatagtgatgtgttgtaa
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integrated database retrieval system