Salvelinus namaycush (lake trout): 120043884
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Entry
120043884 CDS
T07522
Name
(RefSeq) POU domain, class 2, transcription factor 3-like
KO
K09364
POU domain transcription factor, class 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120043884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120043884
03021 Transcription machinery [BR:
snh03021
]
120043884
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120043884
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120043884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120043884
NCBI-ProteinID:
XP_038844416
UniProt:
A0A8U0QKR9
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All DBs
Position
Sna3:43535581..43557106
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AA seq
388 aa
AA seq
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MVWNTQRLNMNKQIKTEDLNDSLHAVSSHKTCHPTQGSPIPGVQAGQLSVELPSLHTMPQ
LVLMSGSHHLSPPSSFLLSQTQHTGHQALLQQNLHSFPTQSQSGLLQHQPGLALTPQAMS
RSGLTSSSMEGHVDMSHLQVPKHIGASQQDDPSDLEELEQFAKVFKQRRIKLGFTQGDVG
LDMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSDSMANVASLPPL
MEGYGRKRKKRTSIETNIKFTLEKRFLVNPKPNSEEITLISEQLSMEKEVVRVWFCNRRQ
KEKRIYCPVSTSPMKSHNFNPRMASTSRSYSPLASGGVSSSPSPNSPSHGPSLGTFSSGS
TALTSQVNQSFSSPGSWYRTWNPMPYHH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggaacactcagaggctcaacatgaacaagcagatcaaaacagaggacctcaac
gactctctccatgcagtctcatcacacaaaacatgtcacccgacacaaggatccccaata
cctggagtccaggcaggccagctgtcagtggagctcccctccctccacacgatgccgcag
ctggtgcttatgtcaggctctcaccacctctcacccccctcctccttcctcctctcacag
acacaacacacggggcatcaagcacttctgcagcagaacctacacagctttcccacccag
agccagtcaggtctcctccagcaccagcctgggttagcactaacacctcaggccatgagt
cggtcgggcctgacgtcgtcgtccatggaaggacacgtggacatgtcccacctgcaggtc
cccaaacacatcggggcctcccagcaggacgatcccagcgacctagaggagctggaacag
tttgccaaggtcttcaaacagagacgcatcaaactgggcttcacccagggtgatgtaggc
ctggatatggggaaactgtatgggaatgacttcagtcagactaccatctcccgcttcgag
gcactcaacctgagcttcaaaaatatgtgcaagttgaagccgctactggagaagtggttg
agcgacgcagagaattctccctctgactctatggccaacgtagcctctctaccccccctg
atggaaggctatggaaggaaaaggaaaaagagaacaagcattgaaaccaacatcaagttc
accctggagaaacgctttcttgtcaaccccaagcctaactcggaggagatcacgctgatc
tcagagcagctgtctatggagaaggaggtggtgcgggtgtggttctgtaaccgtagacag
aaggaaaagaggatctactgccctgtgtccacctcacccatgaaatcacataacttcaac
cccagaatggcctccacgtccagatcatacagccctcttgcttcaggaggagtgtcatcg
agtccctctcctaatagtcctagtcatggaccttcgctcggcaccttctcgtctggctcc
actgctttgacctcccaggtcaaccaatccttcagctcaccagggtcgtggtatcgcaca
tggaaccctatgccctatcaccactga
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