Salvelinus namaycush (lake trout): 120043898
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Entry
120043898 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120043898
00071 Fatty acid degradation
120043898
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120043898
09143 Cell growth and death
04216 Ferroptosis
120043898
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120043898
03320 PPAR signaling pathway
120043898
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120043898
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120043898
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120043898
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120043898
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120043898
Exosomal proteins of breast cancer cells
120043898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120043898
NCBI-ProteinID:
XP_038844429
UniProt:
A0A8U0QM79
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All DBs
Position
Sna3:complement(48373881..48410462)
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AA seq
728 aa
AA seq
DB search
MRFSFPPIASLAEHNLPAVGELSSTLMERMQAQELMSSLRLPELDELTQFFRSLPTSTLV
GIGALTAVLAYWLATRPRAISPPCNLRHQSEEVLHEDGGRRSMLGDSPNKLLAHYHEDAK
TMYEVFQRGLHIAGDGPCLGSRLPDQPYKWLSYKEVTTRAEHLGSGLLSQGCTPSPDQFI
GVFAQNRPEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTADIITVICDKPEKAQVLL
GNVERQDTPGLKRIILMDPFDPALLEQGEGCGVIVQSMQDVEALGREKHRNPMPPTPEDL
SIVCFTSGTTGNPKGVMLTHGNVVADFSGFLKVTDKVIFPNQDDVLISFLPLAHMFERLI
ESVVYCHGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPLKRWLL
NFAAKRKGSEVSRGIIRMDSLWDKIFFSKIQASLGGRLRMIVTGAAPASPTVLGFLRAAL
GCQVYEAYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFAAKGEGEVCV
KGPNVFKGYLKDPGRTAETLDTDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYISP
EKIENIYIRCEPVTQLYVHGDSLQSCLVAIVVPDPETMPAWALKKGMEGSYRDLCKNTVL
KKAIMEDLQRLGKASGLHSFEQVKNIYVHNEQFSIQNGLLTPTLKAKRPELREFFKEKIE
DLYENISM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttctcctttccccccatcgcttcccttgctgagcataatctcccagcggtggga
gagctgagttccaccctgatggagaggatgcaggcccaggagctaatgagcagtctacgg
ctgcctgagctggacgagttaacccagttcttccgctccctgcccacctccacgctggtg
ggaattggtgctctgactgctgtgctggcctactggctggccacacggccacgcgccatc
tctcctccctgcaacctccggcaccagtctgaggaagtgctgcatgaagatgggggtcgc
aggtccatgctgggggacagccccaataagctgctggcacactaccatgaggatgccaag
accatgtacgaggtgttccagagaggcctccacatagccggtgatggaccttgtttaggc
tcccggctacccgaccagccttacaagtggctgtcttataaagaggtcacgacccgggcg
gagcacttggggtcggggctgctgagccagggctgcacgccgagcccagatcagttcatc
ggagtgtttgcacagaacaggccagagtggatcatttcggagctggcctgctacacctac
tctatggtggtggtgcctctgtatgacacactagggcctgatgccatacggtacatcatt
aacactgccgacatcatcacagtgatctgcgacaagcctgagaaggcccaggtgctgctg
ggtaacgtggagaggcaggacacccccgggctgaagaggatcatcctcatggaccccttt
gaccctgccctgctggagcagggggaaggctgcggggtcatcgtccagtccatgcaagac
gttgaggcactgggcagagagaagcatagaaatcccatgccacctacaccagaagacctg
tccatcgtgtgcttcaccagtggtaccacaggaaacccaaagggagtcatgctgacacac
gggaatgtagtggctgatttctcaggcttcctcaaagtcacagataaagtcatattccca
aaccaagacgatgttctcatctccttcctgcctttggctcacatgtttgagagactcatt
gagtctgtggtgtattgtcacggtggccggatcggctttttccaaggtgacatccgcctg
ctgtctgatgacatgaaggccttacggcccaccatcttccccgtggtgcctcgattgctc
aaccgcatgtacgacaagatcttcagccaggccaacaccccattgaagcgctggctgctg
aactttgcagccaagagaaaagggtcagaggtcagccgtgggatcatccgcatggacagc
ctgtgggataagatattcttcagtaagatacaggccagcctgggtgggaggttacgtatg
attgtaactggagctgctccggcctcccccaccgtactgggatttctcagggcagcactg
ggttgtcaggtgtatgaggcgtatggccagacggagtgtactgctggttgtactttcacc
actcctggagactggacctcaggtcatgtgggggcaccactgccatgtaacctcatcaag
ctggtggatgtggctgaaaagaactactttgctgccaaaggagaaggagaggtgtgtgtg
aaagggcccaatgtttttaagggctaccttaaagacccagggaggacggctgaaacgcta
gacacagacggttggctccacaccggagacatagggaaatggttacctaacggtacacta
aagatcattgaccggaagaagcacatctttaagctggcccagggagagtacatctcccct
gagaagatagagaacatttacatccgctgtgagcctgtgacccagctctacgtccatggt
gacagtctacagtcctgtctggttgccatagttgttcctgacccagagacaatgcctgct
tgggccctgaagaaaggcatggaggggagctatcgggacctctgtaaaaatactgtcctg
aagaaagccatcatggaagacttgcagcgactgggcaaggcgagcggcctccactcattt
gagcaggtgaaaaacatctacgtccataatgagcaattctccattcagaatggcctgttg
actccgacactaaaagcaaagagacctgagctgagggagtttttcaaggagaagattgaa
gacctgtacgaaaacatctccatgtga
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