Salvelinus namaycush (lake trout): 120043905
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Entry
120043905 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120043905
04082 Neuroactive ligand signaling
120043905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120043905
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120043905
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
120043905
NCBI-ProteinID:
XP_038844436
UniProt:
A0A8U0QHB4
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Position
Sna3:49565286..49591339
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AA seq
494 aa
AA seq
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MNSARDLRILSIVSSRFSSLKLKFGMTNHSPAMGGRTGTVILCVWACLLMANVLCGKSSG
QNGQTDEQKDNTTVFTRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEY
TIDVFFRQSWKDERLKFKGPMSVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLR
ITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVV
VAEDGSRLNQYDLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVIL
SQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSA
LIEFATVNYFTKRGYAWDGKSVVPEKQKKKKESLLKKNNATAYTAATATAFAPNIARDPG
LATIAKSAPPPPTEPKEEPKPKPPEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYL
NKKPKLQGMTPGSH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgcgcgagacctgcgcatactcagcatcgtcagcagccgtttctccagcctc
aagctcaaattcggcatgacaaaccactctccggccatgggtggacggacaggaacggtc
atactatgtgtgtgggcctgtttgctgatggccaatgtgctttgtgggaaaagctctgga
cagaatggccagacggatgagcagaaagacaacactacagtgttcacccggatcctagac
cgtctcctggatggctatgacaatcgtctcagaccagggttgggagagcgtgtaactgaa
gtcaagactgacattttcgtgacgagtattgggcccgtctcggaccatgacatggaatac
accattgacgtgttctttcgtcaaagctggaaggacgagcggctaaaatttaaaggtcca
atgtctgttctccgtttgaacaacctaatggccagtaaaatctggacccctgacacattc
tttcacaatggcaagaagtctgtggcccacaacatgactatgcccaacaaactcctacga
atcaccgaggagggaactctgctctacactatgagactgacagtaagggcagagtgtccc
atgcacctggaggacttccccatggacgcccatgcttgtccactgaagtttggcagctat
gcttacaccagagctgaggttgtgtacgtgtggacgagaggggcagcccagtctgtcgtg
gtggctgaagatggctctcggctcaaccagtatgatttgatggggcaaagtgtggactct
ggggttgtccagtccagcacaggagagtatgttgtcatgacgacacacttccatctgaag
aggaagattggttattttgtcatccagacgtacctgccctgcatcatgacagtaatccta
tcccaggtgtccttctggctcaacagagagtccgtcccagccaggactgtgtttggagtg
acaacggtgctgaccatgactaccctcagtatcagcgctaggaactctctcccaaaagtg
gcctacgccacagccatggactggttcattgcagtctgctatgcttttgtcttctctgcc
ctcattgagtttgctacagtgaactatttcacaaagaggggctatgcctgggacggaaaa
agtgtggtgccagagaagcaaaagaagaagaaggagtccctcctgaagaagaacaacgcc
accgcctacaccgccgccaccgctacagccttcgctccaaacattgccagggaccctggt
ttggccaccattgccaaaagcgccccccctccccccaccgagcccaaggaggagcccaag
cccaagccgccagaggccaagaagaccttcaacagcgtcagcaagatcgacaggatcgcc
agaatagccttcccgttactcttcggaacctttaacctggtctactgggcaacttacttg
aataaaaagcccaaattacaggggatgaccccgggatcccactaa
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