Salvelinus namaycush (lake trout): 120043990
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Entry
120043990 CDS
T07522
Name
(RefSeq) syntaxin-1B-like
KO
K08486
syntaxin 1B/2/3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120043990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120043990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120043990
Membrane trafficking [BR:
snh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120043990
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120043990
Exosomal proteins of other body fluids (saliva and urine)
120043990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
GNVR
VBS_C3G9
Lzipper-MIP1
Spectrin_Anc-1
YtxH
Motif
Other DBs
NCBI-GeneID:
120043990
NCBI-ProteinID:
XP_038844511
UniProt:
A0A8U0QHG7
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Position
Sna3:66137247..66173666
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AA seq
391 aa
AA seq
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MYTKGTEQQKTNSRGANDFGDRKRADKAGGEFAGFHPEGQIPGGQPYLLPETIPGCRGPV
AIRLSSIPGGVLEDGRAGSPPGPKDMGSNGGQGASLSLYDGFFLSKYRWTKGWAKDSDDD
EEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAILAAPNPDEKTKQELEDL
TADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNTTQ
SKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDIKMDSQIDKQALNEIETR
HTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDFVERAVSDTKKAVKYQ
SQARKKKLMIIVCCTILGVVLASTIGGYLGF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgaagggtacggagcaacagaagacgaacagcagaggggctaatgactttgga
gataggaaacgggctgataaagcagggggagagtttgcgggattccacccggagggacag
attccgggtggacagccataccttctgcccgagacgataccgggttgccggggtccggtg
gcgatccgcttgtcgtcgatacctggaggtgttcttgaggatggccgagcgggctctcct
ccaggcccaaaagacatgggcagtaacggcggacagggggcgtctctctctctctacgat
ggcttcttcctctccaagtacagatggactaagggttgggctaaggacagcgatgatgat
gaagaagttgtccaggttgaccgggatcacttcatggatgagttcttcgaacaggtggaa
gagatccgagtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcat
agcgccatcctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctc
acagctgacatcaagaagacagccaataaagtccgctcaaaattaaaagcaatcgagcag
agcattgagcaggaggaggggctgaacagatcatctgcagacctgcgaattcgtaagaca
cagcactcgacgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcag
tccaaatacagggaccgctgcaaggaccgtatccagagacagctggagatcactgggaga
acaaccaccaacgaggagctggaggatatgctggagagtggcaagcttgccattttcact
gatgatatcaagatggactctcagatagacaagcaggccctgaatgagattgagacccga
cacaccgagatcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtggac
atggccatgctggtcgagagccagggagagatgattgacagaattgagtacaacgtggaa
cactccgtggactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccag
agccaggctcgcaagaagaagctcatgatcatcgtctgctgtactattttgggagtcgtc
ttggcatccactatcggcggatacctgggcttttaa
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