Salvelinus namaycush (lake trout): 120044069
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Entry
120044069 CDS
T07522
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00512
Mucin type O-glycan biosynthesis
snh00514
Other types of O-glycan biosynthesis
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
120044069
00514 Other types of O-glycan biosynthesis
120044069
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120044069
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
120044069
Glycosyltransferases [BR:
snh01003
]
Glycan extension
Type 3 chain
120044069
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
120044069
NCBI-ProteinID:
XP_038844585
UniProt:
A0A8U0QJM0
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Position
Sna3:81402372..81405615
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AA seq
310 aa
AA seq
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MAIAYYRAYQISQETVLLPSRTSSLMGELPSVHHSAVATNASVLSPLHPSPSSGRLLCWV
LTSPQTLWTRAKHIVNTWGPRCDTLLFMSSKPDLLFPGTVLALATEEGRANLYNKTMAAF
NLLHDGYLDKADWFLKADDDTYVIVENLRLLLSRFSPDKPVYLGRRFRRFVHQGYMSGGA
GYVLSRESVRRYVRALHHGTCTKSTSAEDLLLGFCLQKLGVPAGDSRDHQHRETFHPLWL
GKLLCTEDILPKWFHQYNYYPSKVGPDCCSNSSVSFHYVEPVRMYMLDYFLYHLSPVGGH
SPKLGETREE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggccattgcttactacagagcatatcagatctctcaggagacagtgctcttgccctca
cggaccagcagcctcatgggtgagctcccttcagtacaccactctgctgttgccactaat
gcctcagtcctctcgccattgcacccctccccctcttcgggtcgactgctctgctgggtg
ttgacctcaccccagactctgtggaccagagctaaacacatagtgaacacctgggggcct
cgctgtgacacactgctcttcatgagctctaagccggacctcctgttccctgggaccgtg
ctggctctggcaacagaggagggacgggccaacctgtacaataagaccatggccgctttc
aacttactgcatgacggttacctagacaaggctgactggttcctcaaagctgatgatgac
acctatgtaattgtggaaaacttgcgtctgctcctgtctcggttcagcccagacaagcct
gtgtatctgggcagacgttttcgccgctttgtccatcaaggctacatgagtggtggtgct
ggctatgtactgagtcgcgagtctgtgagacgctacgtcagggccctgcaccatggaacc
tgcaccaagtccacctctgcagaggacctactgctgggcttctgcctccagaagctggga
gtcccggcaggggactctagagaccaccaacacagggaaaccttccaccccctgtggctg
ggtaaacttctctgtactgaagacatactgcccaaatggttccaccagtacaactattac
ccttccaaagtgggtccagactgttgctccaattcatctgtatccttccattacgttgag
ccagtcagaatgtacatgctagattacttcctgtaccatctcagtccagtgggtggccac
agcccaaagctgggtgagaccagagaggaataa
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