Salvelinus namaycush (lake trout): 120044092
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Entry
120044092 CDS
T07522
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120044092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120044092
03037 Cilium and associated proteins [BR:
snh03037
]
120044092
Transporters [BR:
snh02000
]
Other transporters
Pores ion channels [TC:
1
]
120044092
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120044092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
120044092
NCBI-ProteinID:
XP_038844609
UniProt:
A0A8U0QMJ7
LinkDB
All DBs
Position
3:86061047..86084651
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AA seq
787 aa
AA seq
DB search
MCQLIRVTGTGLESGSPEILEMEVLTTEGRDRLASHMSDVREQADERSEESMQTNLLVRN
RWSAATLRVLSSMPSRSVGQQSRLEIISQCNIRSTQLRRYHRQTQDVSLSSRPSIRGYGI
EADSEDVCEEETKRQELVNNLQSLSAGDRVRMLRATPLSLAEKSKLRKRVFSDKVGQSLL
SSQVPCCSLLKRALYHVLFGCLFIVSSLQLWQVALKRLGGRFGTGVLSYFLFIRTLLLFN
IFLFLINGLFLVLPQAIHPPLHTPSSHRVTGLELFTGTGYLSNSVMFYGYYTNSTINTSC
RPDEATAGTACSTTSDPHMMAYNIPLAYFLTIGITFFITGIVLVYSMSKSFGRSFRVFKS
QGNLAIKVFCSWDFKVSKKMSVRLQSENITTQLKELLSEVKGGEEEKGRLSGMAVHLLAW
SISLGSTFFCALGIHCFAKHMHLRRLENAEGEVSLVHEARLLALPGVVSCGNLLLPGLFN
LVSWMENFNSPIVRLYVSIFRNLLLKVSILGVLCYHWLGKIAAEPQQHGLQCWESFVGQE
LYRFLLVDFIFTVLYTVFGEFIWKLFSQGVLRRRRKPVFDIARNVLELIYGQTLTWLGVL
FTPLLPAVQILKLLLLFHMKKSSLLVNCQASRKPWRASQMSTLFISLLCFPSFLGATVSV
TYTIWTIKPSSGCGPFRNLPFMFHSGKQWAQELKSTNPKLAWLNWVHSCLVENPLFLFLM
AGVFLMVIYVQTQILDGQRKIISLLQEQIENEGKDKKFLITRLQAIHEKRQYPLSPSSRP
QPQGSEV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtgccagctcattagggtgacgggaacaggtctggagagtggcagtcctgaaatcctg
gaaatggaggtccttacaacggaaggcagagataggttggccagccatatgagtgatgtc
agagagcaggcagatgagaggagtgaggaatccatgcagaccaaccttctggtgaggaac
cgctggtctgccgccaccctgagggtcctgtcctccatgcccagtcgcagcgtcgggcag
cagagtcgtcttgaaataatctcccagtgcaacatccgttctactcagctgcgcaggtac
caccgccagacccaagacgtttccctctcctccagacctagtatccgtggctatgggatc
gaggcagactctgaggatgtctgtgaggaagagaccaagagacaggagctggtcaacaat
cttcagagtctgtcggccggtgaccgtgtgcgtatgctgcgtgccacgcccctcagtctg
gctgagaagtctaaactgaggaaacgtgtattcagtgacaaagttggacagtccctcttg
agcagccaggttccctgctgtagcctccttaagcgagctttgtatcacgtcttgttcgga
tgtctcttcatcgtcagttccctgcagttgtggcaggtggctttgaagaggctgggcggc
cgcttcggcactggtgtgctctcctactttctcttcatcaggactcttctgctcttcaac
atcttcctcttcctcatcaacggcctgttcctggtgctcccccaggccatccacccgccc
cttcacacccccagctcccacagagtcacaggcctggagctgttcaccggcacgggttat
ctctctaactctgtaatgttttatggctactacaccaactccaccatcaacaccagttgt
agacctgatgaagccaccgccgggactgcctgcagcaccaccagtgaccctcacatgatg
gcctacaacattcccttagcctacttcctcaccatcggcataacattctttatcaccggc
atcgtcctcgtttacagcatgtccaagtcctttgggaggagtttccgtgtgttcaagtct
cagggaaacttggccataaaggtcttctgctcctgggatttcaaagtcagcaagaagatg
tctgtcaggctgcagtcggagaacatcaccacccagctcaaggagctgttgtcggaggtg
aaaggcggagaggaggagaagggcaggctgtctgggatggcggtgcacctgctagcatgg
agcatttctctggggagcaccttcttctgtgcactcggcatccactgctttgccaagcac
atgcacctgaggagacttgagaatgcagagggggaggtcagtttggtgcatgaggctcgt
ctgctggctctgcctggggttgtgtcctgtgggaacctgctcctccctggtctcttcaac
ctcgtgtcttggatggagaacttcaactcgcccattgtacgtctctatgtttccatcttc
aggaacttactgctgaaggtgagcattcttggagtactgtgttaccattggctggggaaa
attgcagctgaaccacagcaacatggtctgcagtgctgggagagttttgttggtcaggag
ctgtatcggttcctgctcgtggatttcatattcacggttctctacacagtcttcggagaa
tttatttggaagctgttttctcaaggagtgctgaggagaaggaggaagcccgtgtttgat
atcgcccgtaacgtactcgagctcatctatgggcaaaccctcacctggctaggcgtgctc
ttcactcctttactcccagctgtgcagatcctcaagctgttgttgctgttccatatgaaa
aagagcagtctactggtgaactgccaggcatccaggaagccgtggagagccagtcagatg
agcaccctcttcatctctctgctgtgtttcccctccttcctcggggccaccgtttctgtg
acctacactatatggacgattaagccctcctctggctgtggtcctttcaggaacctcccc
ttcatgttccactcaggcaaacagtgggcccaggagctgaagagtaccaaccccaagctg
gcctggctcaactgggtacacagctgcttggtggagaaccccctcttcctgttcctgatg
gcaggtgtctttctaatggtcatttacgttcagacccaaattttagacggccaaaggaaa
ataatcagtctgctacaggagcaaatagaaaatgaggggaaggacaagaagttcttaatt
actagactgcaggccatccatgagaagaggcagtatccactgtccccttcctccaggcct
cagccacagggcagtgaggtttaa
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