Salvelinus namaycush (lake trout): 120044206
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Entry
120044206 CDS
T07522
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
snh01100
Metabolic pathways
Module
snh_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120044206
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120044206
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
120044206
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
120044206
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120044206
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FAM184
Glyco_transf_7N
Csm1_N
Motif
Other DBs
NCBI-GeneID:
120044206
NCBI-ProteinID:
XP_038844733
UniProt:
A0A8U0QKG6
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Position
Sna3:complement(10486196..10516502)
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AA seq
568 aa
AA seq
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MLRRGLLAWVSRVGVLLVLVCCSLSLLYVMTCSPHSEDNLVSHALPRPGMGVGVGGAAGG
TGAAQSGPTGRNGYQAMLAEREEQHKLHITSLKKQIAQLKEALQERSEQLKGVQDSMERG
TGGGRGGQSPGGGILGEGGQGPGADRSHADLQEFLHSQLGRAEVHQGTRLPSEYAMVPFE
SFTLQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALQSLNTPRNGADKGHTTKVYSA
SDFIEGITRTEKDKGTVYELTFKGDQSREFRKLVLFRPFGPLMKVKNERVDTANVRINII
VPLSQRADKFRHFMHNFREVCVRQDGRVHLTVVYFGKDQMNEVRSTLENTSREINFKNFT
LLQLNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLNTQPGKKVFYPVL
FSQYNPTLIYGNHDHIPPVEQQLVIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGW
GGEDVHLYRKYLHSNLLVVRSPSRGLFHLWHEKRCADELPPEQYRMCMQSKAMNEASHGQ
LGMLFFRHEIEAHLHKQKPQRPNPAKKT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgttctgctggtcctagtg
tgctgctctctgtccctcctctacgtcatgacctgcagcccccactccgaggacaacctg
gtgagccacgccctgccacgccccgggatgggggtcggggtaggaggggcagcagggggc
acgggggcggctcagagcggacccactgggcggaatggataccaagccatgcttgcagag
cgcgaggagcaacacaagctccacatcactagtttaaagaaacagatcgcccagctgaag
gaggcgctacaggagcgcagcgagcagctgaaaggagttcaagactccatggagcggggg
acagggggaggccggggtggccagtccccaggaggaggtatcctcggggagggaggacaa
gggccaggggccgacaggagccacgctgaccttcaggagttcctccacagtcagctgggc
cgggcggaggtccaccaggggactagactacccagtgagtacgccatggtgcccttcgag
agcttcaccctgcagagggtgtaccagctggagatgggcctgacaaggcaccctgaggag
aagcctgtgaggaaggaccggagggatgagctgagtgaagcactagagacagccctgcag
agtctcaacaccccccgcaacggagcagacaagggccacaccaccaaggtctactcagca
tcagatttcatagaaggtatcactcggacggagaaggacaaaggcactgtgtatgagctc
accttcaaaggtgaccagagccgtgagttcaggaagctggttctgttccgtccctttggg
ccgctgatgaaggtgaagaacgagagggtggacacggctaatgtccgcatcaatatcata
gtgcccctctcccaacgagccgacaagttcagacactttatgcacaacttcagagaggtg
tgtgtgcggcaggacgggcgtgtccacctaactgtggtgtactttgggaaggaccaaatg
aatgaagtcaggagcacgctggagaatacatctagggagatcaactttaagaacttcact
ctgctccagctgaatgaggagttctcccgggggcgtggcctggatgtgggcgccagggcg
tggaaaggagggaacgttctccttttcttctgtgatgtcgacatctacttcaccgctgac
ttcctcaacacctgccgactcaacactcaacctggtaaaaaggtgttctatcccgttctg
ttcagccagtacaatccaaccctgatttacggtaaccacgaccacatccctccagtggag
cagcaactggtcattaaaaaggatacaggattctggagagactttggcttcggaatgaca
tgccaataccgatcagatttcatcaacataggtggtttcgacgtggacatcaaaggctgg
ggcggcgaggacgtgcacctttacaggaagtaccttcacagcaacctgctggtggtgcgg
tccccgtctaggggcctcttccacctgtggcacgagaagcgctgcgcggacgagctaccc
ccggaacagtacaggatgtgcatgcagtccaaggccatgaacgaggcctcgcacggccag
ctgggcatgctcttcttccgacacgagatcgaggcacacctacacaagcagaaaccccag
aggccaaaccctgccaagaagacatga
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