Salvelinus namaycush (lake trout): 120044296
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Entry
120044296 CDS
T07522
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120044296
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120044296
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Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
120044296
NCBI-ProteinID:
XP_038844835
UniProt:
A0A8U0U9V9
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Position
Sna3:complement(26302904..26309666)
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AA seq
1138 aa
AA seq
DB search
MENLTPEQWREIVNKKMRFPLELISAIQEGNIVMVCGLLNTGDGIIRQLDDSEDRLWREA
LNLSIRLGNEDTMDALLQGIKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSLAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLTQKGHIIPRPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLSAFGLSRELRKLSKKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDALDQQAFEEGIPNLTRLRLAVNCN
QKQFVAHPICQQVLSSIWCGNLSGWRGSKTAWKLLVSVGIFFTMPLLCLVYWIAPKSKVG
KILKIPVIKFLLHSASYMWFLITLLGESITMELYRDQFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCMDMMVLSMYLASFTLRVLIMLKGHFLCQAPDGTEECAYF
TQTVRQDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAQESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVTQPYLGRFNETFRFLFWTMFGVANQDYVDMPEFVVAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAFFYLIRGIFRQICCCCTLNSTPDYPPITSMMDGGGSGENQIPYRQQVIRA
LVQRYIESERRKFEETKRKDVGNRITELNKVVGRLHAEMKAIMQVLVDSGQAAGDIPNTD
GSSILGKYIMGAKNNFRGFDNKLDNKHTPLRVTVEMGQQGKVGEEKAGAVVMLGDEGMEV
EHDRKVEIGKDGRTAMGLDKKVEMEKEAKDGGMEVKQEVKVDVGLDGAEGMKQVGDMDVV
KMEEGRADGRAEEVVKESEQNMENGGKGEVRVEEMVKETEHKMERRGDSDGKGEKGINKA
RTNEMVEKRVEGEASPGKAEVRMEVKDKGKKVDSSVDNTIRDKGVVGGDKTVNEMGGCGN
EGKVDMGLEDVKEVERKVKAMELKEKRVVGKINVAERWDKGEGRAVEENVTEKKAAKAGM
VVVENTARAGVNILGEKVVPSPSGSSSSQDTGFGSQEGEGSINGGPMRPAYLSASSPD
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacaccggagcaatggcgggagatagtgaacaagaagatgcgcttccct
ttggagctgatcagtgccatccaggaggggaacatagtgatggtgtgtggcctgctgaat
actggtgacggtatcatccgccagctggatgactccgaggaccggctgtggagagaggcc
ctgaacctgtccatccgcctgggcaacgaggacaccatggacgccctcctccagggcatt
aagtttgactttcgccagatccatgaggctctgctggttgccgtggacaccaaccagccc
cgcgtggtgaagaggctcctcgaccgcctggaccaggagaagggcaacaagatggatgtg
cgatccttctccctggccatcttcgaccactctatcgacgactcgcagttcgccccaggc
gtgaccccgctgaccctggcctgtcagaaggacctgtatgagattgtcaccatgctgacc
cagaagggccacatcatcccacggccacacaagatctcctgtgcctgtctagagtgtagg
aacgggcggcagtatgacctgctgaagttctccctgtctcgcatcaacacctaccgtggc
attgccagccgggcctacctgtccatcacctcagaggacgccatgctcagtgccttcggc
ctcagcagggagctacgcaaactctccaagaaggaacccgagttcaagcctcagtacttg
ggtctggaggagctgtgccaggagtttgcggtggagctgctggggatgtgccgtaaccag
agtgaggtcaccactatcctgaacagctgtggagatgaaagccaggacgcccttgaccag
caggccttcgaggagggcatccccaacctgacccgcctgaggcttgcagtcaactgcaac
caaaaacagtttgtagcccaccctatctgccagcaggtgctgtcctctatttggtgtggg
aacctgtctggctggagaggcagcaagacggcctggaagctgctggtgtctgtggggatc
ttcttcaccatgcccctcctctgcctcgtctactggattgcacccaagtccaaggtggga
aagatactgaagattccggtgataaagttccttcttcactctgcatcctacatgtggttc
ctcatcacattgttgggagagtccatcaccatggagttgtacagagatcagtttgcttcg
cgtcagcagaatattctgcacagctcattccacatggtgtgggtggtcgggttcttctgg
tatgaatgtaaggaggtgtggattgaaggtctgcggagctacttcctggactggtggaac
tgcatggacatgatggtgctcagcatgtacttggcctccttcactctgcgcgtcctcatc
atgctcaaaggtcacttcctgtgccaggcccctgacgggactgaggagtgtgcctacttc
acccagactgtgcgccaggactggcatcaggaggacccccagctcatagctgaggtactg
tttgcagtgaccagtatgctgagcttcacccgcttggcctacatcctgcctgcacaggag
tccctgggtacactacagatctccatagggaagatgatcgatgacatgatgaggttcatg
ttcatattgatgattattggaactgcattcctctgtggtatcaataacatctatgttcct
tatgtcacccaaccatatcttggaaggtttaacgagacctttcgtttcctgttctggacc
atgtttggggtggccaaccaggactatgtggacatgcccgagtttgtggttgcagagttt
gtgggcagaatcctttacggcatcttcaccctggtgattgtgatcgtgctgctcaacatg
ctcattgcaatgatcaccaactccttccagaagattgaggatgatgctgacgttgagtgg
aaatttgcccgatccaagctctatctgagttacttccgagaaggtctcactatgcctgtc
cccttcaacatcatcccctcacctaaggcctttttctacctcatacggggtatttttcgt
cagatctgctgctgttgtactttgaactcgacaccagactatccccccataacctccatg
atggatggtggagggtcgggggagaaccagataccttatcgccagcaggtgatacgggct
ctggtgcagcgctacatcgagtctgaacgtcggaagtttgaggagaccaagagaaaagat
gtgggtaatcggatcacagagctaaacaaggtggtgggcaggctgcatgctgagatgaag
gccatcatgcaggttctggtggactctggccaggctgcaggagacatccccaacactgat
ggctcctccatcctggggaaatacataatgggagccaagaacaacttcagggggttcgac
aacaagctggacaacaaacacacacctctacgggtgactgtggagatgggacaacaggga
aaagtgggggaagagaaggctggagcagtggtgatgctaggtgacgaagggatggaggtg
gaacacgacagaaaggtggagataggaaaggatggaaggacagcaatgggactagacaaa
aaagtggagatggaaaaggaggcaaaggatggagggatggaggtcaaacaggaagtaaag
gtggatgtggggctagatggagcagaggggatgaagcaggtaggagacatggatgttgtg
aagatggaggaggggagagctgatggaagggcggaggaggtagtgaaggagtcagagcag
aacatggaaaatggaggaaagggagaggtaagagtggaagaaatggtaaaggagacagag
cacaagatggaaaggagaggagacagtgacgggaagggggagaaggggataaataaggca
cgcaccaatgagatggtggagaaaagggtggagggagaggccagtccgggtaaggcagaa
gtaaggatggaagtgaaagacaaagggaaaaaggtagatagcagtgtggataatacaatc
agggacaaaggagttgtaggaggtgacaaaacagttaatgaaatgggaggatgtgggaat
gaaggtaaagtagacatgggactggaagatgtgaaagaggtagagaggaaggtcaaagcg
atggaactaaaggagaaaagagtggtggggaagatcaacgtggcagagaggtgggataag
ggggaggggagggcagtggaggagaatgtgactgagaagaaggctgccaaggctggcatg
gtggtggttgagaatactgccagggctggggtgaatatcctgggggagaaggttgttcct
tccccgtccggcagcagcagctcacaggacactggcttcggctcacaggaaggggagggg
tccatcaatggaggaccaatgagacccgcatatctgagtgcatcatctccagattag
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