Salvelinus namaycush (lake trout): 120044336
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Entry
120044336 CDS
T07522
Name
(RefSeq) syntaxin-1A-like
KO
K04560
syntaxin 1A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120044336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120044336
Membrane trafficking [BR:
snh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120044336
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
Syntaxin_2
PspA_IM30
AAA_13
Laminin_II
Relaxase_C
Lzipper-MIP1
DUF948
Baculo_PEP_C
DUF677
NPV_P10
Motif
Other DBs
NCBI-GeneID:
120044336
NCBI-ProteinID:
XP_038844880
UniProt:
A0A8U0U9X2
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Position
Sna3:34767156..34793057
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AA seq
208 aa
AA seq
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MEKDRFMDEFFVQVEEIRGFIEELSEKVEEVKRQHSAILAAPNPDEKTKAELEQLMTDIK
KFANKVRSKLKSIEQSIEHEEALSRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRE
RCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSGIIMDSNITQQAMNEIETRHTEII
KLENSIRELHDMFMDMAMLVESQVGWTM
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagatcgatttatggatgagttctttgtacaggtggaggagatccgaggcttc
atcgaggagctctcagagaaggtggaggaggtgaagagacaacacagcgccatcttggcc
gcccccaatcctgacgaaaaaacgaaggcagagctggagcagctgatgacagacataaag
aagtttgcgaacaaagtgcgctccaagttaaaaagcattgaacagtccatagagcatgag
gaggctttaagcaggtcgtctgcagatctgaggatacgtaagacacagcattccacgttg
tcacggaagtttgtggaggtgatgtcagagtataatgccacgcagtcggactaccgggaa
cgctgcaagggccgcatccaaagacaactggagattactggtaggaacacaactaatgag
gaactggagagcatgctggagagtgacaaccctgccatcttcacatcagggatcatcatg
gactccaacatcacccagcaggccatgaatgagattgagacgagacacactgagatcatc
aagctggagaacagcatcagagaacttcacgacatgttcatggacatggccatgctggtg
gagagccaggtaggatggactatgtag
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