Salvelinus namaycush (lake trout): 120044654
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Entry
120044654 CDS
T07522
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120044654
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120044654
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
NGL family
120044654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_14
ig
LRR_1
V-set
Ig_2
LRR_NXF1-5
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
120044654
NCBI-ProteinID:
XP_038845256
UniProt:
A0A8U0QMF4
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Position
Sna3:complement(80678734..80682601)
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AA seq
733 aa
AA seq
DB search
MRITTVTCLPCPSPLLLLLVHLLVRLLLSGPEFVGAASPCPTHCSCSNQASRVICTRQSL
DGVPESISVNTRYLNLQENSIEVIKSDTFKHLRHLEILQLSKNKISQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVKVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTTMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVGVSYFTTVTVETVEPNEGPTVYAGVMNSHNESYVITPSG
HQWRGGLPTTASSLSAWSLSSSRATRPTFTVPITAETGYSGLDDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGAGGRGSGISGGGTVSRDGG
GGGGVGGGQSLRMHHPEMVNLPNLARQEHLNHYYKAHHFNNNMMGLGMGLNNNNNPSLSP
CSQTQSTPNSCAQGHTSTSGGTPTGGSLPSPVPLPQLGIHSSLKGLMGKGQNPQIEPLLF
KSGSKENVQETQI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgacctgccttccctgcccctcccccctcctcctcctattggtc
cacctgctagtgcggcttctcctctctgggccagaatttgtaggggccgcctccccctgc
cccacccattgcagctgctccaatcaggccagtcgagtcatctgtacgagacagagtctg
gatggggtgcctgagagcatatcagtcaacacacgatacctcaacctgcaagagaattca
atagaggttatcaagtcagacaccttcaagcacttgaggcaccttgagatcctgcagctg
tctaagaacaaaatcagtcagattgaggtgggagcattcaatggcctgcccaacctcaat
acgctggagctgttcgacaaccgcctcaccctggtcccctcacaggccttcgagtacctc
agcaagctgcgggagctgtggttacggaacaaccccatcgagacgctgccgggctacgcc
ttccaccgcgtgccttcgctgcgccggctggacctgggagagctcaagaagctggactac
atctcagacgccgccttcgtgggcctggtcaacctgcgctacctgaacctgggcatgtgt
ggtctgaaggacatccccaacctgacggccctggtgcgtctggaggagctggagctgtct
gggaaccgtctggagatcatccggcctggctccttccagggcctggtgtcgctccgtaag
ctgtggctcatgcactcgcaagtgaaggtcatcgagcgcaatgccttcgacgacctgaag
aacctggaggagctcaacctttcccacaactccctgcactcgctgccccatgacctcttc
accccgctgcaccagctggagcgggtgcacctcaaccacaacccctgggtgtgcaactgt
gacgtgctgtggctcagctggtggctgaaggagacggtgcccagtaacactacgtgctgc
gcccgctgccacgctccccccggcctgaagggcaggtacatcggggagctggaccagagc
cacttcacctgctacgctcccgtcatcgtggagccgcccaccgacctcaacgttaccgag
ggcatggctgcagagctgaagtgtcgcacgggcaccaccatgacctcggtcaactggctc
acgcccaacggcaccctgatgacccacggctcctaccgggtccggatctccgtgctgcac
gacggtacgctcaactttaccaacgtcacactgagggacacgggtcagtacacctgcatg
gtgaccaactcggctggcaacaccacggcaaccgccgtgcttaatgtcactgccgccgac
gttggcgtcagctacttcactactgtcaccgtggagacggtggagcccaacgagggcccg
acagtctacgcgggcgtcatgaacagccacaacgagtcatacgtcattaccccgtctggc
caccagtggaggggggggctccctaccaccgcctcctccctgtcagcctggtccttgtcc
tcgtcccgggccacccgacccacctttactgtgcccatcactgccgagacgggctattct
ggccttgatgacgtgatgaagaccaccaagatcatcattggctgcttcgtggccattacc
ttcatggcagccgtgatgctggtggtcttctacaagctgaggaagcagcaccagctgcac
aagcaccacggccccgcccgcgccatcgagatcatcaacgtggaggacgagattggcgcc
ggtgccggtggacgcgggagcggtatctcagggggcggcaccgtctctcgggatggaggc
ggagggggaggagtaggaggagggcagagcctgaggatgcatcacccggagatggtcaac
ctgcccaacctggccagacaggagcacctcaaccactactacaaggcccaccacttcaac
aacaacatgatgggcctgggcatgggcctcaacaacaacaacaacccctccctctccccc
tgttcccagacccagagcacccccaactcctgcgcacaggggcacacctccaccagcggt
ggcacccccacgggtggctcgctgccctcccctgtgcccctgccccagctgggcatccac
agctctctgaaggggctcatggggaaagggcagaaccctcagatcgagcctctgctcttc
aagagtggctccaaggagaatgtgcaagagactcagatctga
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