Salvelinus namaycush (lake trout): 120044659
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Entry
120044659 CDS
T07522
Name
(RefSeq) coronin-1A-like
KO
K13882
coronin-1A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120044659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120044659
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120044659
04147 Exosome [BR:
snh04147
]
120044659
Membrane trafficking [BR:
snh04131
]
Endocytosis
Phagocytosis
Coronins
120044659
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120044659
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120044659
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_4
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
Trimer_CC
Beta-prop_EML
WDCP
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
DUF7310
Beta-prop_HPS5
bZIP_1
BLOC1_2
TSC22
Beta-prop_SPT8
DUF5798
DUF6779
DivIC
ZapB
Motif
Other DBs
NCBI-GeneID:
120044659
NCBI-ProteinID:
XP_038845261
UniProt:
A0A8U0QIY2
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Position
Sna3:complement(80962873..80971508)
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AA seq
456 aa
AA seq
DB search
MSRKVVRASKFRHVFGQGVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFL
VLPLNKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLVTPL
NDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVACGEAMVRIDSVHPDLIYS
ACWNRDGSQILTSCKDKTIRVLDPRKGTVIAEKEKTHEGSRPVKALFVSDGKILSTGFSR
MSERQVALWDPKSFGEPLTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQD
DLYPDTNGPEPSVEANEWFEGKEGQPILISLKDGFATTTKSKEFKVHKSLLKTTSAATGH
QHDNTGEVHALQKEVKTLKETVEELTKRVSELESKN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggtagtcagggccagtaagttccgtcatgtcttcggccagggggtgaag
gctgaccagtgctacgatgacatccgcatctcccagatgacctgggacagcaacttctgc
tctgtcaaccccaagttcgtggccatgattgtggatgccagcggaggaggggccttccta
gtgcttcctctgaacaagacgggtcgtattgacatgtcccagcccacagtctgtggacac
acaggcccagtgctggatattgagttctgtccccacaacgacaacatcattgccagtggc
tcagaggactgcagtgtcatgatttgggagatcccggagggtggcctggtcacgcccttg
aacgaccctgtggtgaagctggaggggcactccaaacgcgtgggcatcctcagttggcac
cccactgcccacaatgtgctcatgagcgcaggctgtgacaacgtggtgatcctgtggaac
gtggcgtgtggagaggccatggtgaggatcgactcggtccaccctgacctcatctacagt
gcctgctggaacagggacggatcccagatcctcacctcctgtaaggacaagaccatacgt
gtgctggacccccgcaagggcacagtcatcgccgagaaggagaagacccacgaaggctcc
aggcctgtcaaggctttgtttgtgtccgatgggaagatcctgagcaccggcttcagtcgc
atgagtgagaggcaggtggcactttgggacccgaagagctttggggagccactcaccctg
caggagttggacaccagcagtggtgtcctattgcccttctttgaccctgacactggcatc
gtctacctctgtggcaagggtgacagcagtatccggtactttgaggtgacggatgaggct
ccctatgttcactacctgtccatgtacagcagtaaggagagtcagaagggcatgggctac
atgcccaagaggggcctggaggtcaacaagtgtgaaatcgccaggttttacaagctccat
gagaggaagtgtgagcccattgtcatgacggtgccccgcaagtctgacctgtttcaggat
gatttgtacccagacaccaatggtccagagccgtctgtggaggccaatgagtggtttgaa
ggcaaagagggccaacctatcctgatctccttgaaggatggttttgcaacaaccaccaaa
tccaaagagttcaaagttcacaaaagtcttctgaagaccacatcagcagccacggggcat
cagcacgataacactggggaggtacatgccttgcagaaggaggtgaagactctgaaggaa
acagtagaggagctgaccaagcgcgtgagcgaactggagagcaagaattga
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