Salvelinus namaycush (lake trout): 120044682
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Entry
120044682 CDS
T07522
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120044682
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
120044682
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_4
Ank_2
Ank
Ank_3
Ank_5
SAM_1
Motif
Other DBs
NCBI-GeneID:
120044682
NCBI-ProteinID:
XP_038845285
UniProt:
A0A8U0QLK9
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Position
Sna3:complement(84925463..84944909)
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AA seq
484 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVGRGGNPDK
CDIWGNTPLHLAAANGHHNCLSFLVSFGANMWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQSALNPKLVGKLKERAFREAERRIKECVKLQRKHHKRMERKFHKEAASEQSMSDAMS
FSSYTSSSVSRKLHHLNTTTVSVPYSQATLHATTRGKTKIQKRLEKRKQGDGTFKIYEDG
RKSVRSLSGLQLGNDVMFLKQGTYVGPRDRAGRRGNLRDIFHGDANDDAISRAISEPDLS
YRPNMEYSEVSTDSGHDSLFNRPGLGTMVFRRNYISGGLFGIGGRDEGSLSGGTERAGSA
NVRLRSRLRRSPSLDDGGDSIGSARSLQERNRQDLPWDEVELGLDDDCEAVTSPLEVFLA
AQTMGEFLTVFRREKIDLEALLLCSDQDLKSIHIPLGPRKKILDACKRRLETLEDPDYIE
DTLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtatcacaaggcggcccgggatggctacctggacctgctgaaagaggct
acgcggaaggacttgaacgcgccggatgaagatggcatgacaccgacgttatgggccgct
tatcatggcaacttggaggctctacgacttatcgtgggcagaggaggcaaccctgataag
tgtgacatatgggggaacacacctctccacctggcagccgccaacggccaccacaactgc
ctgtccttcctggtgtccttcggtgccaacatgtggtgcctggacaacgactaccacacg
cccctggacatggccgccaccaaaagccacatggactgtgtccgctacctggactcgatt
gccgccaagcagtcggcccttaaccccaagctggtggggaagctgaaggagcgggctttc
cgcgaggccgagaggaggattaaggagtgtgtgaagctgcagcggaaacaccacaagcgc
atggagcgcaagttccacaaagaggcggcgtcggagcagtccatgtcagacgccatgagc
ttctccagctacacaagcagctcagtgagccgcaagctgcaccacctaaacaccaccact
gtcagtgtgccatactctcaggctactcttcacgccacaacccgaggcaagaccaagatc
cagaagaggttggagaagaggaagcaaggggacgggaccttcaagatctacgaggacggc
aggaagagcgtgcgctccctctcgggcctccagctgggcaacgatgtcatgttccttaaa
cagggaacctatgtcggccctcgggaccgcgcagggcgccgcggaaacctccgagacata
ttccacggagacgccaacgacgacgccatctctcgtgccatcagcgagccggacttgtct
taccggcccaacatggaatactctgaggtcagcaccgactcgggccacgactctctcttc
aaccggcccggtctgggaaccatggtgttccgacgcaactatatcagcggcggcctgttc
ggcatcggcgggcgcgacgaggggagcctcagcggaggaaccgaacgggctggcagcgcc
aacgtgcggctgcgcagccggctgcggcgttcgcccagcctggacgatgggggggacagc
atcggcagtgcccgcagcctccaggaaaggaaccgccaggatcttccctgggacgaggtg
gagctggggctggatgatgactgcgaggccgtcaccagcccgttggaggtgttcttggct
gcgcagaccatgggcgagttcctcactgtcttcaggcgggagaagattgacctggaggcg
ctgctgctgtgctcggaccaggacctcaagagcatccacatccccctggggcccaggaag
aaaatcctggatgcctgcaagagacgtctggagacccttgaggaccctgactacatcgag
gacaccctgctgtga
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